PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_018406-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ERF
Protein Properties Length: 220aa    MW: 24020.7 Da    PI: 4.8664
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_018406-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-182575155
            AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   ++ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  NNU_018406-RA 25 KKYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 75
                   59*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.0E-302684IPR001471AP2/ERF domain
SMARTSM003803.6E-342689IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-202684IPR016177DNA-binding domain
PfamPF008471.2E-112675IPR001471AP2/ERF domain
PROSITE profilePS5103221.6942683IPR001471AP2/ERF domain
PRINTSPR003671.5E-82738IPR001471AP2/ERF domain
CDDcd000186.96E-182985No hitNo description
PRINTSPR003671.5E-84965IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    Send to blast
MVKTEEKIQC AEPSKPVQSS SSRKKKYKGV RMRSWGSWVS EIRAPNQKTR IWLGSYSTPE  60
AAARAYDAAL LCLKGSSANL NFPTASSAYI PDTIMSPKSI QRVAAAAANN TSDTTSTPTT  120
PSPSPPPPPS SSALSSPSPS PSSSSSDHND DDYCPLLPGW ANDSTYEAEE PIRVIDPWME  180
FYDLQSPKYS SQMLNAATSF TTPALEEFYE EGDIRLWSFC
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator involved in the regulation of plant development and tolerance to abiotic stresses (PubMed:21069430). Involved in salt and osmotic stress response pathways. May be regulated by the stress-related genes RD29A, RD22, DREB1A or P5CS during stress response (PubMed:27137403). Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:21069430, ECO:0000269|PubMed:27137403}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) and ethylene. Down-regulated by freezing and heat stresses. {ECO:0000269|PubMed:21069430}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010274320.11e-159PREDICTED: ethylene-responsive transcription factor ERF014
SwissprotQ9SFE49e-46ERF12_ARATH; Ethylene-responsive transcription factor ERF012
TrEMBLA0A1U8B0S91e-157A0A1U8B0S9_NELNU; ethylene-responsive transcription factor ERF014
STRINGXP_010274320.11e-158(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.14e-36ERF family protein
Publications ? help Back to Top
  1. Kazama D,Kurusu T,Mitsuda N,Ohme-Takagi M,Tada Y
    Involvement of elevated proline accumulation in enhanced osmotic stress tolerance in Arabidopsis conferred by chimeric repressor gene silencing technology.
    Plant Signal Behav, 2014. 9(3): p. e28211
    [PMID:24614501]
  2. Kazama D, et al.
    Identification of Chimeric Repressors that Confer Salt and Osmotic Stress Tolerance in Arabidopsis.
    Plants (Basel), 2013. 2(4): p. 769-85
    [PMID:27137403]