PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_012187-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ERF
Protein Properties Length: 185aa    MW: 20829.9 Da    PI: 10.9315
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_012187-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP244.93e-1483131355
            AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                    y+GVr ++  g+W +eIr+p++   + r++l +f t+e+A +a++ a+++++g
  NNU_012187-RA  83 YRGVRMHS-FGKWISEIREPRK---KSRIWLRTFPTPEMATRAHDVAALNIKG 131
                    9****999.9*********843...6***********************9988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003801.7E-2782145IPR001471AP2/ERF domain
PROSITE profilePS5103220.37682139IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.1E-2582140IPR001471AP2/ERF domain
PRINTSPR003671.3E-98394IPR001471AP2/ERF domain
CDDcd000181.02E-2683141No hitNo description
PfamPF008471.3E-883131IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-1883140IPR016177DNA-binding domain
PRINTSPR003671.3E-9121141IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    Send to blast
MIAIKYGLPM TVNLSSIVEE TVMIACEAAQ NSSSTTTFLG LNSFAELNIT PKISKEVVQE  60
VKNANEARRR QKTNSNDGNQ LSYRGVRMHS FGKWISEIRE PRKKSRIWLR TFPTPEMATR  120
AHDVAALNIK GNSAFLNFPE LAHELPRLAT YHTKTSRLLL PKQLQPHSTS NQQVAKLKPK  180
TNASR
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010264432.11e-118PREDICTED: dehydration-responsive element-binding protein 3-like
TrEMBLA0A1U8AP961e-117A0A1U8AP96_NELNU; dehydration-responsive element-binding protein 3-like
STRINGXP_010264432.11e-118(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60490.11e-37ERF family protein