PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_011051-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family G2-like
Protein Properties Length: 78aa    MW: 9062.23 Da    PI: 11.0995
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_011051-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like31.25e-105273122
        G2-like  1 kprlrWtpeLHerFveaveqLG 22
                   kpr++W+peLH+rF++a++qLG
  NNU_011051-RA 52 KPRRCWSPELHRRFLNALHQLG 73
                   79*******************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.603.0E-85073IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    Send to blast
MHDLNQKPSE IERKKGGGTF HPFQRDDKLT TPSIRTINGD NRGKAKSQTN RKPRRCWSPE  60
LHRRFLNALH QLGDTILD
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in phosphate signaling in roots. {ECO:0000250|UniProtKB:Q9FX67}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010263055.11e-31PREDICTED: myb family transcription factor EFM-like isoform X1
SwissprotQ9FPE81e-12HHO3_ARATH; Transcription factor HHO3
TrEMBLA0A1U8ACC93e-30A0A1U8ACC9_NELNU; myb family transcription factor EFM-like isoform X1
STRINGXP_010263055.14e-31(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25550.16e-15G2-like family protein
Publications ? help Back to Top
  1. Nagarajan VK,Satheesh V,Poling MD,Raghothama KG,Jain A
    Arabidopsis MYB-Related HHO2 Exerts a Regulatory Influence on a Subset of Root Traits and Genes Governing Phosphate Homeostasis.
    Plant Cell Physiol., 2016. 57(6): p. 1142-52
    [PMID:27016098]