PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_008492-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family G2-like
Protein Properties Length: 167aa    MW: 18758.4 Da    PI: 8.4747
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_008492-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like33.31.1e-102045126
        G2-like  1 kprlrWtpeLHerFveaveqLGGsek 26
                   kprl+Wt eLH+rF+eav++LG ++ 
  NNU_008492-RA 20 KPRLKWTRELHQRFIEAVAKLGRADS 45
                   79*******************76554 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.609.8E-101948IPR009057Homeodomain-like
TIGRFAMsTIGR015576.2E-82045IPR006447Myb domain, plants
PfamPF143791.4E-21105151IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene3DG3DSA:1.10.10.609.8E-10108131IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MGTQKMQNQH MSLVLSTYAK PRLKWTRELH QRFIEAVAKL GRADSTGNPK SSVEGDGYPW  60
PYFVPPKEPF TDIVEGDYVG TEVRGGNVSG EMIGRIPTHM NDNLQIAQAL QMQMEVHKKL  120
LEQIEVQRHL QLRIEAQGKY LQSVLEKAQE TLAGCNSSCV GTRSCKS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010257629.12e-57PREDICTED: myb family transcription factor PHL8-like isoform X1
SwissprotF4I2742e-34PHL8_ARATH; Myb family transcription factor PHL8
TrEMBLA0A1U8A6X05e-56A0A1U8A6X0_NELNU; myb family transcription factor PHL8-like isoform X1
STRINGXP_010257629.18e-57(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69580.17e-37G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]