PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_002384-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family ERF
Protein Properties Length: 147aa    MW: 16186.1 Da    PI: 4.4597
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_002384-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.92.5e-182271255
            AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                   gy+GVr ++ +g+Wv+eIr+p++   + r++lg+f t+e+Aa a++ a+++l+g
  NNU_002384-RA 22 GYRGVRVRR-SGKWVSEIREPKK---SSRIWLGTFPTPEMAATAYDVAALALKG 71
                   8*****999.7*********954...5***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF541719.15E-182273IPR016177DNA-binding domain
PROSITE profilePS5103220.4552283IPR001471AP2/ERF domain
SMARTSM003803.7E-242285IPR001471AP2/ERF domain
PfamPF008475.2E-122271IPR001471AP2/ERF domain
CDDcd000186.23E-272375No hitNo description
PRINTSPR003675.6E-82334IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.0E-252373IPR001471AP2/ERF domain
PRINTSPR003675.6E-84561IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 147 aa     Download sequence    Send to blast
MNSDGRFPGF GTNTIPGHKP GGYRGVRVRR SGKWVSEIRE PKKSSRIWLG TFPTPEMAAT  60
AYDVAALALK GLTSRDQGKI NSSSVISEIS LDSNEYIDED FIFDMPNLLL NMAEGMLLSP  120
PPLEVAEDEE DEVTTESTGN QNLWSHP
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019052225.14e-87PREDICTED: LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF024
SwissprotQ9SJR01e-30ERF24_ARATH; Ethylene-responsive transcription factor ERF024
TrEMBLA0A1U8Q2G38e-86A0A1U8Q2G3_NELNU; LOW QUALITY PROTEIN: ethylene-responsive transcription factor ERF024
STRINGXP_010248418.11e-84(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11590.11e-11ERF family protein