PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_000023-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family G2-like
Protein Properties Length: 512aa    MW: 57237.4 Da    PI: 6.7436
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_000023-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like52.98e-17131185155
        G2-like   1 kprlrWtpe.LHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                    kp+l+W  + LH+ F+++++++ G e+AtP ++l+lm+v+g+t+++v SHLQ+ R+
  NNU_000023-RA 131 KPKLCWEDNgLHDLFMDVIRKI-GLENATPAKLLKLMNVPGITVQQVTSHLQRLRT 185
                    79****8644************.9*****************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011010.561139IPR001789Signal transduction response regulator, receiver domain
Gene3DG3DSA:1.10.10.604.3E-16128188IPR009057Homeodomain-like
SuperFamilySSF466892.69E-9130188IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-15131185IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000160Biological Processphosphorelay signal transduction system
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 512 aa     Download sequence    Send to blast
MSDNIDMSTA IRVLENGACF FHMKPLSMDA LWGIWQHVLI KRVSQRRETE EAGSMEDVGF  60
FKALEGIDCQ SLVNGRRTKF KRMREEHEES KGNQKTNNED LKEKKKSKGM ALAAEEEQCE  120
SKNTVSSRAK KPKLCWEDNG LHDLFMDVIR KIGLENATPA KLLKLMNVPG ITVQQVTSHL  180
QRLRTYVRSR NQLAATMKKR GRKDRSIFNV PIGPAPKTSH PFSQSDIAPR IDLSQQLSRN  240
RRQEAMLHAR LPATTHENQM LPFHAQRRNG NLSGIFDMML AQDWRMGASS SCIEPAGRSD  300
ATQMIHPHLQ VEPRELESRA VDDQRMLSLS AQTQNISYLG HVGSLDSSFQ QPSMENILSS  360
PGVQMMNNVE PPRPSNSLNR DQPTRAPVNG IQNICPCPNS SLNQDQPTRT QADGIQNVCD  420
VGGAGHCQNA ELMEESGDTL DDLAGSFCLD FNDLMESPPF ENSTSVPSKQ LDGVDFDKVF  480
SDQCVANIES QQQSHMGNNP RSDFSVKFTD GA
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010243610.20.0PREDICTED: uncharacterized protein LOC104587367 isoform X2
RefseqXP_019054495.10.0PREDICTED: uncharacterized protein LOC104587367 isoform X1
TrEMBLA0A1U7YTF60.0A0A1U7YTF6_NELNU; uncharacterized protein LOC104587367 isoform X2
TrEMBLA0A1U8Q8T60.0A0A1U8Q8T6_NELNU; uncharacterized protein LOC104587367 isoform X1
STRINGXP_010243610.10.0(Nelumbo nucifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.22e-23response regulator 1