PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf10713g00006.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 286aa    MW: 32983.2 Da    PI: 5.0125
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf10713g00006.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.42.8e-102314427128
                       NAM  27 kleleevikevdiykvePwdLpk......kvkaeekew......yfFskrdkkyatgkrknra..tksgyWkatgkdkevlsk.. 95 
                               +l+ + +i+ +d+yk ePw   +           e++w      yf ++r+k+   + r  r+   + g Wk++ k+k+v+ k  
  Niben101Scf10713g00006.1  23 ELHDNGFIAMCDVYKQEPWVTYShghstgG---VEDNWdtsiyrYFITPRKKN---KGRFCRTvgKRGGSWKQQDKEKAVTIKsc 101
                               445556799**********99633443331...22233334433555555443...4567774124589************9977 PP

                       NAM  96 ....kgel..vglkktLvfykgrapkge......ktdWvmheyrl 128
                                   +  +  +g  k++ + ++++ k          +W+m+ey l
  Niben101Scf10713g00006.1 102 dqrkR--DliIGRMKSMCYTEKNNTKCInsddynDGKWLMKEYVL 144
                               65433..156**********76555544222232778******87 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100514.3931168IPR003441NAC domain
SuperFamilySSF1019413.79E-1225166IPR003441NAC domain
PfamPF023651.0E-639144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    Send to blast
MILEKGIISS DGFGVSEISF KQELHDNGFI AMCDVYKQEP WVTYSHGHST GGVEDNWDTS  60
IYRYFITPRK KNKGRFCRTV GKRGGSWKQQ DKEKAVTIKS CDQRKRDLII GRMKSMCYTE  120
KNNTKCINSD DYNDGKWLMK EYVLSDPILN KFSNSERKDY VICAIKKLPK RKKVDTEVTS  180
GMNNYVVHPL MDQDYFFDQA IVESVELVMV ETEVSVGINS VENQEYNEVI TPIYYIEKPM  240
EESEVQTHEV VGAENGSSLL GLTTFSQTQE AIISDFENAM QEYWTY
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622624.11e-157PREDICTED: uncharacterized protein LOC104113990
TrEMBLA0A1J6IJZ51e-161A0A1J6IJZ5_NICAT; Uncharacterized protein
STRINGXP_009622624.11e-157(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1500848