PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf08531g03004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 92aa    MW: 10860.3 Da    PI: 6.7702
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf08531g03004.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.13.3e-10481375
                       NAM  3 pGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLp.k...kvkaeekew..yfFskrdkkyatgkrkn 75
                               GfrF+Ptd+e +  +L + v+gk+++ + +  ++vd+y k ePw++  +   + + e++    yf +k +kk+  + r +
  Niben101Scf08531g03004.1  4 LGFRFRPTDSEEL-MFLLRFVTGKEMHDAGFiTTNVDVYgKQEPWEIYdHgvsCGDDEDSTSyrYFITKLKKKS--NARYH 81
                              6********8877.6999999999988878735677*99456*****744443222233333225555544443..34444 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.11E-7482IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 92 aa     Download sequence    Send to blast
MEQLGFRFRP TDSEELMFLL RFVTGKEMHD AGFITTNVDV YGKQEPWEIY DHGVSCGDDE  60
DSTSYRYFIT KLKKKSNARY HRSCLLYTSR CV
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019261439.15e-52PREDICTED: NAC transcription factor 32-like
TrEMBLA0A1J6IHC94e-49A0A1J6IHC9_NICAT; Uncharacterized protein
STRINGXP_009603640.12e-48(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA22191254