PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf07579g01012.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family ERF
Protein Properties Length: 267aa    MW: 30211 Da    PI: 6.7305
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf07579g01012.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2651.5e-2062111255
                       AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                               +y+GVr+++ +g+W+AeIrdp+    + +r++lg+f+tae Aa a+++a++k++g
  Niben101Scf07579g01012.1  62 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEAAAIAYDEAALKFKG 111
                               7********.**********94....45************************988 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.106.2E-3361120IPR001471AP2/ERF domain
SuperFamilySSF541712.22E-2262120IPR016177DNA-binding domain
CDDcd000185.93E-2262120No hitNo description
PfamPF008478.7E-1462111IPR001471AP2/ERF domain
PROSITE profilePS5103224.90862119IPR001471AP2/ERF domain
SMARTSM003802.2E-3862125IPR001471AP2/ERF domain
PRINTSPR003671.8E-116374IPR001471AP2/ERF domain
PRINTSPR003671.8E-1185101IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0050832Biological Processdefense response to fungus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MSAMVSVLSQ VIGNTNNNTN ISSVNSSVHA ISPLTLPQST GANLQNQSQS TQEQGNQQRK  60
RHYRGVRQRP WGKWAAEIRD PKKAARVWLG TFDTAEAAAI AYDEAALKFK GNKAKLNFPE  120
RVQGKTEFSF LTNTTQQEFG IVGQQLPATS SMNNNLPYFQ PNYLSQEHFP NVHHYAQLLR  180
DGNNFEMNFR VSPNFYRPIS EGFVSESLPN SSLELQQGTS HEQEQGDSYN QQQEEDFLRF  240
PFHYGNSNSS TGPNTGESNW EDFEHRK
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A2e-2661122163ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019264409.11e-155PREDICTED: ethylene-responsive transcription factor ERF114-like
TrEMBLA0A314L4G11e-154A0A314L4G1_NICAT; Ethylene-responsive transcription factor erf115
STRINGXP_009804195.11e-154(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13330.13e-34related to AP2 6l