PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf05491g02004.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 541aa    MW: 60198.7 Da    PI: 7.0658
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf05491g02004.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.83e-10211248542
                               CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                    bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                               k  rr+++NReAA++sR+RKka++++Le+    L++  
  Niben101Scf05491g02004.1 211 KTLRRLAQNREAAKKSRLRKKAYVQQLETSRIRLSQLE 248
                               7789************************8655555544 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.8E-7205253No hitNo description
SMARTSM003386.3E-7207284IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.105209253IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.04E-6211253No hitNo description
CDDcd147088.77E-23211263No hitNo description
PfamPF001701.1E-7211248IPR004827Basic-leucine zipper domain
PROSITE patternPS000360214229IPR004827Basic-leucine zipper domain
PfamPF141443.4E-31292364IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    Send to blast
MASQGIGETG LTNSGSSNYH NMPYAVFRGL TPATTSFIYH STPNLFLACV NKNMCYSIQD  60
GSFGFGELEE AFALQGFKIN NDEAKESLYA AASTGKPAAT LNIFPSWPMR FQETPRENSK  120
SREEDISTDS GSLSSRAQAH LEPESPISTK ASSEQNQLQI TQQQQQQLHQ EMSSHNNPRT  180
GNLQTESAPK PNNMEKRKGA GSTSERMADP KTLRRLAQNR EAAKKSRLRK KAYVQQLETS  240
RIRLSQLEQE LQRARTQGIF LGGGTAAGAN ISSGAALFDM EYSRWLDDDQ RHMSELRTAL  300
QAHLSDGDLR LIVDGYIAHY DEIFSLKGVA AKSDVFHLIT GMWTTPAERC FLWMGGFRPS  360
ELIKASVACN FARMSSLLPM WWFGSIVPSP VMLIGQLDPL TEQQLMGIYS LQQSSQQAED  420
ALSQGLEQLQ QSLIDTVASG SINDGMHHMA LALGKLSNLE GFVRQADNLR QQTLHQIHRI  480
LTVRQAARCF LVIGEYYGRL RALSSLWLSR PRETLIADDS SCQTTTELQM VHSSQNHFSN  540
F
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00131DAPTransfer from AT1G08320Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019229531.10.0PREDICTED: transcription factor TGA2.2-like isoform X1
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A314KL970.0A0A314KL97_NICAT; Tgacg-sequence-specific dna-binding protein tga-2.1
STRINGXP_009623541.10.0(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-179bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]