PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf02510g02007.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family bZIP
Protein Properties Length: 511aa    MW: 56790.5 Da    PI: 6.8336
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf02510g02007.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_132.12.4e-10207247441
                               XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS
                    bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 
                                k  rr+++NReAAr+sR+RKka++++Le+   + ++Le+e
  Niben101Scf02510g02007.1 207 AKTLRRLAQNREAARKSRLRKKAYVQQLETsriRLAQLEQE 247
                               6889************************9733355555555 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003388.0E-7204281IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-8206252No hitNo description
PROSITE profilePS502179.163206250IPR004827Basic-leucine zipper domain
PfamPF001702.9E-7207247IPR004827Basic-leucine zipper domain
CDDcd147082.37E-20208258No hitNo description
SuperFamilySSF579592.17E-6208250No hitNo description
PROSITE patternPS000360211226IPR004827Basic-leucine zipper domain
PfamPF141443.2E-31289364IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 511 aa     Download sequence    Send to blast
MESQRIGDSV SLSAESGPSH HHHNMSYALF RGLNPPNTSF MCHSTPNNQE QPAFDFGALE  60
EAIVLQGVKM SDDEAAKASL YAATNRPAAT LEMFPSWPTR FHHTHTPRGS SKSGGEESSE  120
SGSALNTYSS RGEPHLEPES PISGKPSSGY QSLEQNQQQQ LQPPQQQLQE MASDSPRTGV  180
SHTEPASKSN YEKRKGVGST SDRVVDAKTL RRLAQNREAA RKSRLRKKAY VQQLETSRIR  240
LAQLEQELQR ARSQGLFMGG GAAAGANISS GAAMFDMEYS RWLDDDQRHI SELRTALQAH  300
LGDGDLRIIV DGYIAHYDEI FQLKGVAAKS DIFHLITGMW TTPAERCFLW MGGFRPSELI  360
KMLIAQLDPL TQQQVVGIYS LQQSSQQAEE ALSQGLEQLQ QSLIETLANA SLNDGMRHMA  420
LALGKLANLE GFVRQADNLR QQTLHQLHRI LTVRQAARCF LVIGEYYDRL RALSSLWASR  480
PREAMLGDDN SCQTTTELQM IQASQHHFSN M
Functional Description ? help Back to Top
Source Description
UniProtTogether with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269|PubMed:20805327, ECO:0000269|PubMed:27717447}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by flg22 in leaves. {ECO:0000269|PubMed:27717447}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016485811.10.0PREDICTED: transcription factor TGA2-like isoform X2
SwissprotQ93XM60.0TGA9_ARATH; Transcription factor TGA9
TrEMBLA0A1S4BA750.0A0A1S4BA75_TOBAC; transcription factor TGA2-like isoform X2
STRINGXP_009772593.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA36832340
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08320.31e-175bZIP family protein
Publications ? help Back to Top
  1. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  2. Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S
    Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22.
    Plant Sci., 2016. 252: p. 12-21
    [PMID:27717447]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]