PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Scf02336g02011.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family G2-like
Protein Properties Length: 400aa    MW: 46700.2 Da    PI: 9.0705
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Scf02336g02011.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like38.13.3e-12124148226
                   G2-like   2 prlrWtpeLHerFveaveqLGGsek 26 
                               prlrWtpeLH++Fv+a+e+LGG+ek
  Niben101Scf02336g02011.1 124 PRLRWTPELHRSFVHAIERLGGQEK 148
                               8**********************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-10120149IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 400 aa     Download sequence    Send to blast
MIHIGLFLSL KTSLPNLLRK LEVAMTENSV KQANEEMMTN TMEYLMEKTS SDSSSQRKMV  60
SFIDLNEDNK EESDEEEEEV IEISVENSSE KTRDEGNSEN NNNSSGNGRV EKKNVRHYVR  120
SKMPRLRWTP ELHRSFVHAI ERLGGQEKKL ITYLIQMYRS KKLDESGQGR NKAMQGRSFF  180
YGNVGQRYNP LQDFKMKNGA IVLARNFNYD HDHGHFRNSF SRPPCQAKDI FSRYLQWSSN  240
QGSLLNTTRE KLWTPRQFQK NGGHEIGPVR SSQFLEEKRG PPSEFIANQL EEKIADFSNI  300
YSAKKSQYLL QQNVTQPYSK WNCRYNTLEQ NFETPTKLEM KEDKSFMTEK DWLPDLQLRL  360
SRSTENKNEK NTHHSKRMDH QTDINTMLSL SLPNYSSSAT
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_019246921.10.0PREDICTED: uncharacterized protein LOC109226576 isoform X1
TrEMBLA0A1U7YGB50.0A0A1U7YGB5_NICSY; uncharacterized protein LOC104247786
STRINGXP_009802187.10.0(Nicotiana sylvestris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA55162334
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38300.18e-17G2-like family protein