PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Niben101Ctg15918g00002.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 523aa    MW: 58842.2 Da    PI: 4.4198
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Niben101Ctg15918g00002.1genomeBTI-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM46.51.2e-1451279128
                       NAM   9 Pt.deelvveyLkkkvegkkleleevikevdiykv.ePwdLpkkvkaeekewyfFskrdkkyatgkrknratk..sgyWkatgkd 89 
                               P+ d+e v+ +L k v g ++++ ++i+ v++y   +P++L +++ +e++  y F++ +k++a+gk+ +r++    g Wk   k+
  Niben101Ctg15918g00002.1   5 PSfDDEHVMSHLLKFVCGIPTRC-HHIRLVQLYGNkKPSELFQQL-EEKSTDYVFTQLKKTSARGKNYKRSIVggGGSWKVLDKS 87 
                               544889999***********999.78****9996549****7555.334566******************54434889******* PP

                       NAM  90 kevlskkgelvglkktLvfykg.rapkgektdWvmheyrl 128
                               k+v++kkg ++g kk++ f +  ++++ ++  W m+ey+l
  Niben101Ctg15918g00002.1  88 KPVFDKKGCVIGFKKSFRFDDTnDHSSDSRIVWSMKEYSL 127
                               *******************955267777899*******97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.1561154IPR003441NAC domain
SuperFamilySSF1019411.03E-168153IPR003441NAC domain
PfamPF023652.3E-58127IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 523 aa     Download sequence    Send to blast
MKMEPSFDDE HVMSHLLKFV CGIPTRCHHI RLVQLYGNKK PSELFQQLEE KSTDYVFTQL  60
KKTSARGKNY KRSIVGGGGS WKVLDKSKPV FDKKGCVIGF KKSFRFDDTN DHSSDSRIVW  120
SMKEYSLNDT IVKLLRQRRQ IRHEDYVVCR ITKTVNSCAS SQNVVPLAIS GENSVANVTT  180
QDPLMLGHLN YVPTSCLSQD QEKASVISWA PSPVDQFQFQ ENQESELSNF WNENECMRVD  240
SLLTEESNTA PLIQLPLIST EEAECSAAVE PTLLSPFNET FEPLTEEELA IFDNLLVQAQ  300
KDQETASVVC RITKTVNLCA RSQNVPLAIS GDNSVGNVMS QEPQMLGHLN YVPTSCLSQD  360
QEKASIISWT PSPVDQFQFQ ENQESELSNF RNENECISVD SLLAKESNAA PLIQLPLIST  420
EEAECSAAVA PTYTALPSFN EPFEPLTEED LAFFDKSFMQ KDQETASVRP KNDIATYHKE  480
LDAYAAEILK LNPPLVPDIP QYLEDECPLF PEDFYIGPTA LWS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009615661.11e-163PREDICTED: uncharacterized protein LOC104108353
STRINGXP_009615661.11e-163(Nicotiana tomentosiformis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA1802124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G04060.12e-07NAC domain containing protein 46