PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Medtr1g081570.1
Common NameMTR_1g081570
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Trifolieae; Medicago
Family GeBP
Protein Properties Length: 100aa    MW: 11302.9 Da    PI: 9.0741
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Medtr1g081570.1genomeMtView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57339.41.7e-122899995
           DUF573  9 eeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskki 95
                     +eDei++LqG++d++ ++g+s+++di  fy+++               K rrLKk   +  +k + gk+++f+++h+q +fe+s+ki
  Medtr1g081570.1 28 NEDEITILQGFLDYNVNRGSSYHNDIGSFYDQI---------------KFRRLKKNHCMVLHKFDFGKDFAFKRAHYQATFEISHKI 99
                     69*****************************98...............68**********************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045043.1E-82899IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    Send to blast
MSTFATTAAI PTTIILALPN TAATANVNED EITILQGFLD YNVNRGSSYH NDIGSFYDQI  60
KFRRLKKNHC MVLHKFDFGK DFAFKRAHYQ ATFEISHKI*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003591031.12e-69DUF573 family protein
TrEMBLG7I7E62e-69G7I7E6_MEDTR; DUF573 family protein
STRINGGLYMA19G43180.16e-21(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.11e-16DNA-binding storekeeper protein-related transcriptional regulator
Publications ? help Back to Top
  1. Young ND, et al.
    The Medicago genome provides insight into the evolution of rhizobial symbioses.
    Nature, 2011. 480(7378): p. 520-4
    [PMID:22089132]