PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 56291
Common NameMICPUN_56291
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
Family bZIP
Protein Properties Length: 356aa    MW: 37235.2 Da    PI: 10.6948
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
56291genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1408.5e-13217271357
             XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57 
             e++r+rr+ +NRe+ArrsR+RK++ ++ Le  + + +aeN aL ++l e +  v+
   56291 217 EVRRQRRMLSNRESARRSRRRKLEHVATLEGQINQHKAENLALLERLRESEARVE 271
             689*****************************************99999887766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.6E-12215279IPR004827Basic-leucine zipper domain
PfamPF001701.1E-10217270IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.025217280IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.0E-10219281No hitNo description
SuperFamilySSF579597.72E-10219265No hitNo description
PROSITE patternPS000360222237IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 356 aa     Download sequence    Send to blast
MPMERTASVE DMVGNLWRLG RTPSQAEFEQ FFSNIAQVGS QQNLAAQAAA AQAAQAAQPE  60
TNGTDATGIP RVASIDLLRK MIMQGQQPPV APAMVPNLMN PMAGMGAMQT GLGGAGLGVA  120
GMIPGVGAAG INPVALAAAG IPGNVAPPSP KVEKKPPKRA PAPKTKAPAN KKTSPAPAKK  180
GVKREASADP SDKASDDDFS DSEGGEGEGG KGKTTDEVRR QRRMLSNRES ARRSRRRKLE  240
HVATLEGQIN QHKAENLALL ERLRESEARV EAVVRENAQL KAEIVRMSEV AGAGGKPMER  300
ASSLQRIASA GNLAKSNLGG TASPQMSGDD SPRGFVPFRS LQSYENLLSL QAQGR*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCP0013230.0CP001323.1 Micromonas sp. RCC299 chromosome 2, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002499993.10.0predicted protein
TrEMBLC1E0700.0C1E070_MICCC; Uncharacterized protein
STRINGXP_002499993.10.0(Micromonas sp. RCC299)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP822355
Publications ? help Back to Top
  1. Worden AZ, et al.
    Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.
    Science, 2009. 324(5924): p. 268-72
    [PMID:19359590]