PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID 63688
Common NameMICPUCDRAFT_63688
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas; Micromonas pusilla
Family bZIP
Protein Properties Length: 506aa    MW: 51414.2 Da    PI: 5.3188
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
63688genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_133.96.7e-111411050
            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
  bZIP_1 10 kqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50
            + +NRe+ArrsR+RK+  +  L+ kv++L+ae  +L   l 
   63688  1 MLSNRESARRSRRRKQSHLGDLQAKVDALQAEKNDLSRALR 41
            579*******************************9996665 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003389.7E-4156IPR004827Basic-leucine zipper domain
PfamPF001709.4E-8141IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.852144IPR004827Basic-leucine zipper domain
SuperFamilySSF579597.74E-8143No hitNo description
Gene3DG3DSA:1.20.5.1705.3E-7344No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 506 aa     Download sequence    Send to blast
MLSNRESARR SRRRKQSHLG DLQAKVDALQ AEKNDLSRAL RAMQFNFQRA LERNRYAKRS  60
LSYLREQVMS DRTLSREAIV AATTAVMMER APAPQGEPCV GGGGYGGALE AATAGAGDAP  120
SAAARRPAAA APVAAEDDAI DHHHHRGHHG THPVLRQMNM HDARANGLFG VGGASAGFAS  180
LGFVGAVDSG PGPSLGFSGA GDSATTTTTG PSFTSPGGFL GRGSIGGSFQ GGFRGVIGDG  240
HEGLILPSSG DDGVRGGIGV GGVGGGTSSD AEAAAVVSRR FHAMPFPGPL GAGDDDDDDA  300
LAAAAAAARG AREPSHGGSS GNSEYDAVAF RAEDGKGGDG DGDDDDDDDD DPLDTLLRSC  360
TNVDVAAADD ALEPIAWVAG VIDPDVVDPA GGGGGGSAEK TRAAAATKSL RNGVHHANAV  420
VWEPVTTTTT TETEDAPSLL ESPPPPPSTT TRPINNKKMD RSDSMNRVAS LERMNYQKTR  480
TATRGGSPSP LGDPQRKASA ASAIA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1815RRSRRRKQ
21015SRRRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003063376.10.0predicted protein
TrEMBLC1N5J90.0C1N5J9_MICPC; Predicted protein
Publications ? help Back to Top
  1. Worden AZ, et al.
    Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas.
    Science, 2009. 324(5924): p. 268-72
    [PMID:19359590]