PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0108s0049.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family C2H2
Protein Properties Length: 322aa    MW: 35004.6 Da    PI: 7.6967
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0108s0049.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.70.00019253275223
                          EETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   2 kCpdCgksFsrksnLkrHirt.H 23 
                          +Cp+C ++F +k  Lk+H +  H
  Mapoly0108s0049.1.p 253 RCPHCRQRFESKQGLKSHVQArH 275
                          7*****************98766 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM004431.7E-11113159IPR000467G-patch domain
PROSITE profilePS5017413.844115161IPR000467G-patch domain
PfamPF015851.0E-11116157IPR000467G-patch domain
PROSITE patternPS000280254275IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEESRGLKTR RNYRRRHCSH GGDDEEEDEE DDDDEKDEKD EKNFGLNFES RAGEDGNLKQ  60
PSASSVIPVD EAVGAYDSAL GSVDGGSLSA PPPSPPREAS GAQGVGSGRN GARIASGIGF  120
HMLRAMGWTE NTGLGQSRKG MVDPILPTSK TGNLGLGFNA SSTSVHDTQQ EAIRHLQKAK  180
REERDRKLKL KLEKAQEAEE DDVFMRESFI AVSANSDGHP LESSSSSFVE GATESKTPST  240
LSGSGLKLEE VGRCPHCRQR FESKQGLKSH VQARHAKLLR ATTRRPFKKE RRRKGAAEKQ  300
SGQRGAARAL APVKQDFSVY D*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WCY80.0A0A2R6WCY8_MARPO; Uncharacterized protein