PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0092s0004.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 192aa    MW: 20752.9 Da    PI: 4.0154
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0092s0004.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding284.9e-095351547
                         HHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding 15 avkqlGggtWktIartmgkgRtlkqcksrwqky 47
                         +++++G++ W+ I + ++ gR+ + +k+rw+k 
  Mapoly0092s0004.1.p  5 GHQKFGNR-WAEITKLLP-GRSSNGIKNRWNKT 35
                         699*****.*********.************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.998140IPR017930Myb domain
CDDcd001672.50E-6134No hitNo description
SuperFamilySSF466895.71E-9243IPR009057Homeodomain-like
PfamPF002493.9E-7534IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.603.2E-11635IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MLFLGHQKFG NRWAEITKLL PGRSSNGIKN RWNKTMTKRA DAMEDYSEKW INRNTFGDML  60
SLTDDVNPKE LEASQDLLAL NGQANIDLQA SNAAEDLLAL NGQANIDLQD SNAAEDLLAL  120
NGQANIDLQD SNAAEDLLAL NGQANIDLQD SNAAEHLLAL NGQVNIYLQD SNAAEDLLAL  180
NSDFGLAVGS R*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6WGQ21e-130A0A2R6WGQ2_MARPO; Uncharacterized protein
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11510.24e-12myb domain protein 3r-4