PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0089s0067.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family C2H2
Protein Properties Length: 408aa    MW: 44711.1 Da    PI: 9.2045
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0089s0067.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.82e-05177198323
                          ETTTTEEESSHHHHHHHHHH.T CS
              zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                          Cp+Cg++Fs  + L+ H  + H
  Mapoly0089s0067.1.p 177 CPKCGETFSKAEALEAHHISqH 198
                          *****************98877 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS501578.683175203IPR007087Zinc finger, C2H2
PROSITE patternPS000280177198IPR007087Zinc finger, C2H2
Gene3DG3DSA:3.90.228.104.1E-16200406IPR012317Poly(ADP-ribose) polymerase, catalytic domain
SuperFamilySSF563997.58E-24200406No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003950Molecular FunctionNAD+ ADP-ribosyltransferase activity
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 408 aa     Download sequence    Send to blast
MPSSWTSWKR ALSCKTDRDQ VIEPHSMIPP SSKSSVGMKS KKHYSARSCS RSLLSLRDVI  60
HGNTRVVHKQ SSPRSVATSD DCLRQVSPDL SYCDTRSSSG GTPSEVGSVF GRSNSRSGSL  120
TSTPLSHASY VFKGTPLRKL SGCYDCNMAY ETLDSMQLVY REGSLHGSYC GSPKAGCPKC  180
GETFSKAEAL EAHHISQHAV TELNKGDSSR NVVEIIFRTS WLKKELPCGK IERILKVHNT  240
QRIVAKFEEY RDAVKARAAK MTKKHPRCMA DGNELLRFYG TFLQCQLGAH GASNLCLMPN  300
CHCCQLIRSG FHAKKEAGRG IYTTATSGKA HDSIALPEDD LKGKRAMLVC RVIAGRTHKA  360
LDNEDLTFLP TGYDSIAGES GPYANIDELL VFSSRAVLPC FVVIYKL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002974384.21e-113uncharacterized protein LOC9658046
TrEMBLA0A176VX560.0A0A176VX56_MARPO; Uncharacterized protein
TrEMBLA0A2R6WHX00.0A0A2R6WHX0_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP6611439
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27240.12e-99C2H2 family protein