PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0025s0094.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 1029aa    MW: 115200 Da    PI: 4.544
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0025s0094.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.9e-07705753247
                          SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHH CS
      Myb_DNA-binding   2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqky 47 
                          +rWT+eE+  ++ +vk+ ++      W+  ++ ++ g+  k+++s+++++
  Mapoly0025s0094.1.p 705 DRWTKEEERTFKALVKMNPPSldknFWEHLPEAFP-GKKMKELVSYYFNV 753
                          69*****************88**************.***********996 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466898.58E-5703754IPR009057Homeodomain-like
SMARTSM007174.3E-5703756IPR001005SANT/Myb domain
CDDcd001679.00E-6706754No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1029 aa     Download sequence    Send to blast
MIGQQKRSLE HSVSPQPTKY QKQFDDNFCE TSTRIASSAG EQFDFHELFS GVHSHHASPS  60
PSATRSDSTR SGDKASALDP SDQHREPIVH SEVDQGPQCS ACHELPYPSP GYEGCESAEA  120
LCTQTCCEEK VDIHKECASF PSDLGNHAQG TIGSVDIFSA DNSGPARLHA AEDLSSLHGK  180
SSQKEELLKN AFKSTSLQLG GIECGSSCQE DEGPSTTDAY EMGIEGDRAF VECVRKSMES  240
RRLNGFRPLL VYPSARARIE DFANEGGLDD EKGGKFSLFV GEQFAESDPY QEKVERTMVN  300
DGDLQKRGVC RQISDRFEDQ FDKQISRKEK DAGRQHSFYR GGGGQAGQRI QCASTRPGIP  360
NSIQGWEDTQ AAQSSDSQLP KNHEGLSSPP RQETTKEVGR NSEELGRASN SALEGNDRSL  420
SSTLIWIKRM ALDPGNPHMG EGVEGSGQNA EWVKDCASQA ERIRGLFCKR KEEIRLGGAE  480
PHLHQAKQNS TSYYYEELPR SDHPSVERFR ASRERVAQYG YPGSPGSHRS FHESSHYLQR  540
GSSPQSQHHW SSQTSQRLPR QSNFHSSYIE TAYSDYNNLI ERPRKRIPIG SDFQAHVPPE  600
KSVETKSSCQ REGPLGDETQ SSDEDDEESE RWFGKQVWPP PGFNSSSYPD MQVGVGRAIS  660
CTCLDPESID CVRTHVRQEK LRLEREVGQA FYTWKFDEMG ECVSDRWTKE EERTFKALVK  720
MNPPSLDKNF WEHLPEAFPG KKMKELVSYY FNVFMLKRRA VQNRLEGRQI DSDDDETELP  780
EGDSEDSEDY DSGEEPDEEA DEEVSEAEDD TDQLNESYGG GERSGKLLEH TGFCDLRGVN  840
LVYCSTNMDS LGEGPDSVHT NLCPSSDLNL ENEEQDYRSS RREERDVRLH SVQLTTKWTL  900
EQHDEEKHVE LPVTVLGEEE LQEVKTWEDP HWDEADNDRD VVKQDGDLDA TFSGKDDQGA  960
LSPIRNNSVQ KVIGFDDDQQ NSLSSCESEV WVGTMDTAPR KADDKLLSTN GMIQELFGDD  1020
SPEAHSPS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XBB30.0A0A2R6XBB3_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP301445