PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Mapoly0014s0193.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Marchantiophyta; Marchantiopsida; Marchantiidae; Marchantiales; Marchantiaceae; Marchantia
Family MYB_related
Protein Properties Length: 660aa    MW: 66138.7 Da    PI: 10.2778
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Mapoly0014s0193.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding30.67.9e-10213257144
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 
                          r+ WT+eEd+ l+ av++ G g+W+ I +      Rt+ q+  rw
  Mapoly0014s0193.1.p 213 RKLWTQEEDQELIAAVEKCGEGNWTNILKGAFtHDRTAAQLSQRW 257
                          567**************************9999999999999999 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.605.0E-15207260IPR009057Homeodomain-like
PROSITE profilePS5129419.257208265IPR017930Myb domain
SuperFamilySSF466893.04E-13210262IPR009057Homeodomain-like
SMARTSM007178.2E-10212263IPR001005SANT/Myb domain
PfamPF002492.5E-8213257IPR001005SANT/Myb domain
CDDcd116601.37E-13216262No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 660 aa     Download sequence    Send to blast
MGKKGTLCES EIGQILRRYS AVTVMGLIRE IARCESSKLD FNALVKKSST GISCAREYQA  60
LWRHIAYRAE LDDAYEEDAE LLEDDSDLEF ELEPAPSVSP EVAAEAANWV KADMQRFGIV  120
APKRKGDLLT KLKSRDADSA STVGNQAPAS SGLSASATDI SAKGAPAAAS APAWDAGTTS  180
PTGTTNQISS ATPESPSAAS TRIALGQSER KKRKLWTQEE DQELIAAVEK CGEGNWTNIL  240
KGAFTHDRTA AQLSQRWALI RKRREVQAAA AQKAIPGSSS GGAADAQQGA NQLATSTSGA  300
KVSQNGGTFV VSSATQLASP VTPGAAFSPL TPPVAITGPT PGPSTSAQPQ IQGLHVSGSS  360
SNSPGSIVVT SAPNGTLAPS GGSLDGVSYK TAPQVARPSG APTVRTGAVV TQRQGQAVGA  420
ARSTAGSSTA SAALSTEQIR GGVAKTVGSG VGAGRLIAPG AVVMSAAAAQ AASVGGSEMW  480
QASSLPPAAT QSSVPAKYGS RGNAGPSSGR VNMLMKQQIT GPDPGVQAAA VAAGARIAPA  540
SAAASLLKAA QSGNVVHIGP GGVPITKTGL QNQAGIGHGS NVGSRGSSGG AIVHYIRTGA  600
GAPPPSLPGM MRPSQQQKSQ PGKSPGVNQI SNSAASKQQS SPAPSSATSQ AVTPPSQSK*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A2R6XHV70.0A0A2R6XHV7_MARPO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP59231520
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09710.18e-21MYB_related family protein