PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010110801.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TCP
Protein Properties Length: 532aa    MW: 59555.4 Da    PI: 8.6303
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010110801.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1141.9e-351783353133
             TCP   3 gkkdrhskihT.kvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssss 81 
                     ++kdrhskihT    +R RR+Rls+++a++fFdLq+ LGf ++skt+eWLl++a  +ik+l ++               ss+++++c        
  XP_010110801.1 178 KRKDRHSKIHTgTTRPRHRRMRLSIDVAREFFDLQELLGFERASKTVEWLLRKARSEIKKLKDSnneggssstcpemqtSSPNSESC-------- 264
                     79*********4468*************************************************76544433333333211112222........ PP

             TCP  82 asnsssg.........................kaaksaakskksqksaasalnlakesrakarararertrekmrik 133
                           +                            k+ +k ++s+++  + + lake r+kar+rarertrekm+++
  XP_010110801.1 265 ------EgasgldevgingedqgvagtssskpPLVKERKKYSRSNSKRIAINPLAKELREKARERARERTREKMSKR 335
                     ......12344455555566666777766655333444456666666667799999******************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036347.0E-35178334IPR005333Transcription factor, TCP
PROSITE profilePS5136927.706179238IPR017887Transcription factor TCP subgroup
PROSITE profilePS5137011.48314331IPR017888CYC/TB1, R domain
Sequence ? help Back to Top
Protein Sequence    Length: 532 aa     Download sequence    Send to blast
MFNLPPNSWN VNNNDPINSF SHDQYYSHNF QKPFPNQQEY QYNYTLNSKQ EVSHHLDHPQ  60
YHSCTDQPLS FPNGYTSPFE DQNLLPQNSH GINVSQQFYY SQPSFVKESA EKTSDVLLPS  120
ETFTPTITGS KLVKLDSDRS GEDLSKSVAP THQYDQPQIL RKRSGGGCGD SGNNKSKKRK  180
DRHSKIHTGT TRPRHRRMRL SIDVAREFFD LQELLGFERA SKTVEWLLRK ARSEIKKLKD  240
SNNEGGSSST CPEMQTSSPN SESCEGASGL DEVGINGEDQ GVAGTSSSKP PLVKERKKYS  300
RSNSKRIAIN PLAKELREKA RERARERTRE KMSKRVERVE PAIQNHRGSS GGGGGGGSRT  360
NIANHNKDHD DHGLNINQPA SNKSEEKQQM GDQLPNQNID MNNNIVTPNS SLGAVMQVSR  420
YDQRYEFSQE ILPISNPNGW NIVQVSNHDH ILQTSTTSTS TTAPIVDYET YSYLVNHLEK  480
WNNSLVANSV SNFGTTSGAT GFGVPQQTSS IFNGTINIMV TSEWCNGNVR LK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160179RKRSGGGCGDSGNNKSKKRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010110801.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109345.10.0transcription factor TB1
TrEMBLW9S6C50.0W9S6C5_9ROSA; Uncharacterized protein
STRINGXP_010110801.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68800.12e-20TCP domain protein 12