PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109477.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TCP
Protein Properties Length: 164aa    MW: 17922.9 Da    PI: 5.0971
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109477.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP89.57.6e-2811125289
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.....................ssssasecea 75 
                      +k++r++++hTkv+gR+ RvRl+a caar+ +L++eLG+++d++tieWLl+ a+   + ++ t                     +s s+s ce+
  XP_010109477.1  11 SAKRSRSKDRHTKVSGRGCRVRLPAMCAARVSQLTRELGYKTDGQTIEWLLEHAQLPSIGAAATatctgngvvlggetnansslpPSCSESVCEK 105
                     5799**************************************************96666666565899999999887655543332222245555 PP

             TCP  76 esssssasnsssg......k 89 
                     +++++++ +s s+       
  XP_010109477.1 106 KDHVVKKCHSFSRdqpafdF 125
                     55555544444443333330 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036349.6E-2416149IPR005333Transcription factor, TCP
PROSITE profilePS5136919.6921771IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 164 aa     Download sequence    Send to blast
MNSEISSTGP SAKRSRSKDR HTKVSGRGCR VRLPAMCAAR VSQLTRELGY KTDGQTIEWL  60
LEHAQLPSIG AAATATCTGN GVVLGGETNA NSSLPPSCSE SVCEKKDHVV KKCHSFSRDQ  120
PAFDFDLLTN FDMEFSANEI ALLQALTSET QEEEAEEEED KRKE
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109477.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010109477.11e-119transcription factor TCP9
SwissprotO646473e-26TCP9_ARATH; Transcription factor TCP9
TrEMBLW9S2L71e-118W9S2L7_9ROSA; Uncharacterized protein
STRINGXP_010109477.11e-119(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45680.15e-26TCP family protein