PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010109365.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 203aa    MW: 23695.5 Da    PI: 4.3044
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010109365.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM805.1e-25311581128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp G+rF P d el+ +yL +k+ +++l++ ++ik +d+y+++P +Lp k ++  +e++ ++F++++ ++   +++  +t++g W + g++++++
  XP_010109365.1  31 LPSGYRFLPDDYELIIYYLLNKILHRRLPV-DAIKVLDLYTCDPDKLPiKDFELsTENKAHYFMETRDTHV--EQNVITTENGEWVQNGEEEAIH 122
                     699***************************.99***************75444424457788887766543..34555899************** PP

             NAM  94 skkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                     + +++ vg kk+  f  k ++p+  +t+W+++e rl
  XP_010109365.1 123 HGDNTIVGFKKVRHFQwKISSPEVCETQWIINELRL 158
                     *99999*********9677**************987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.58E-2524165IPR003441NAC domain
PROSITE profilePS5100524.0831175IPR003441NAC domain
PfamPF023652.4E-1232158IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    Send to blast
MAENQYGGAE FDNLLSKSSV EVQLNLEDLH LPSGYRFLPD DYELIIYYLL NKILHRRLPV  60
DAIKVLDLYT CDPDKLPIKD FELSTENKAH YFMETRDTHV EQNVITTENG EWVQNGEEEA  120
IHHGDNTIVG FKKVRHFQWK ISSPEVCETQ WIINELRLNI GVIPDQILMN NNIMKEFQRL  180
NSLYIDQEDE DKNEDDNAVN LGV
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010109365.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLW9SCT51e-148W9SCT5_9ROSA; NAC domain-containing protein 29
STRINGXP_010109365.11e-149(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15772611
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G46590.14e-18NAC domain containing protein 96