PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010108517.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 369aa    MW: 40231.9 Da    PI: 7.1067
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010108517.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF573104.49.1e-33157250197
          DUF573   1 klfqrlwseeDeivlLqGlidfkaktgkspsd.didafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkifelskk 94 
                     klfqrl seeDeiv+L+Glid++ak+g +p + d+ +f+ f+kks++++v+k ql++K+rrLKkK+ ++ ++    k+ + +k+h+q++felskk
  XP_010108517.1 157 KLFQRLGSEEDEIVILKGLIDYAAKRGGDPAAtDMYGFHYFIKKSLHVEVTKAQLSNKVRRLKKKYSNNAAR----KKYNPTKPHEQNVFELSKK 247
                     579*************************99888***************************************....788899************* PP

          DUF573  95 iWg 97 
                     iWg
  XP_010108517.1 248 IWG 250
                     **8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.9E-29159250IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 369 aa     Download sequence    Send to blast
MAPRRASPLD VPPAVSSSEE EETSSEEEET SEDAQVQATP KPTVISPNTK KTDDDSESDD  60
ESSSESEPAD LTVQPLPSKP MEEKGARSKS SVAATPEKKS VAKRPRESET TAKDSKKRVK  120
KKSDPEVPPP EADGDGGGAS DEEQEESKKP GGDDSKKLFQ RLGSEEDEIV ILKGLIDYAA  180
KRGGDPAATD MYGFHYFIKK SLHVEVTKAQ LSNKVRRLKK KYSNNAARKK YNPTKPHEQN  240
VFELSKKIWG GGGSRAGASS PKSNGAAKSN GKATLDLPAA PKDGSRKSEI GGKSSVSVRS  300
SEMIRYGMKS LPEEVVKKGL DLLPESKKAE LDAMWKKLHI DELELFVEKN QLMNEQVKLV  360
LEKLKSSDH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1216229RLKKKYSNNAARKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010108517.10.0hypothetical protein L484_019363
TrEMBLW9S7U60.0W9S7U6_9R
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18313490
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61730.12e-25DNA-binding storekeeper protein-related transcriptional regulator