PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107507.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TCP
Protein Properties Length: 214aa    MW: 22707.3 Da    PI: 8.0273
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107507.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP108.51e-3359158789
             TCP   7 rhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg............ 88 
                     +  ++hTkv+gR+RRvR++a caar+F+L++eLG+ +d++tieWLl+ a+++i ++tg+++ +a  + ++++ + ++s++s++            
  XP_010107507.1  59 SARDRHTKVNGRGRRVRMPAMCAARIFQLTRELGHRSDGETIEWLLRHAEASIVAATGSGTLPAGPVsTSSAAVTASSSPSIScraqpvsavagg 153
                     5689*******************************************************666664442222222222222222333333344444 PP

             TCP  89 ....k 89 
                         +
  XP_010107507.1 154 qglfA 158
                     33431 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036346.9E-3059207IPR005333Transcription factor, TCP
PROSITE profilePS5136925.94860114IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0007623Biological Processcircadian rhythm
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MASEIALHHK FSASASSSDG NSSDAVVPSH AVAITEARTT QQQQQEQLAV ADPRKVSSSA  60
RDRHTKVNGR GRRVRMPAMC AARIFQLTRE LGHRSDGETI EWLLRHAEAS IVAATGSGTL  120
PAGPVSTSSA AVTASSSPSI SCRAQPVSAV AGGQGLFAAM TAAPAQPPPP NCRLDLCQPV  180
TLEYHRNMSF TTLLLQSSTT EAEQRQQEEA LREH
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107507.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107507.21e-155transcription factor TCP11
SwissprotQ9SJK75e-34TCP11_ARATH; Transcription factor TCP11
TrEMBLW9S7N41e-153W9S7N4_9ROSA; Uncharacterized protein
STRINGXP_010107507.11e-154(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF38193363
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69690.12e-33TCP family protein