PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107124.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 486aa    MW: 54926.8 Da    PI: 6.9814
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107124.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1256e-39111341128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp+GfrFhPtdeel++++ k k++gk+ +++++i+evd++k+ePwdLp + +v+++++ w+fF++r      g r++r+t +gyWk+tg+dk+++
  XP_010107124.1  11 LPVGFRFHPTDEELINYFWKLKTTGKDAQVDHIIAEVDLCKWEPWDLPsQsRVQSDDTLWWFFCRR------GPRPKRTTGTGYWKSTGQDKDIK 99 
                     79****************************999**************96358889999******98......569******************** PP

             NAM  94 skkgel.vglkktLvfykgrapkgektdWvmheyrl 128
                      k+g++ +  kktLvf++gr+p  ekt+Wv+hey +
  XP_010107124.1 100 GKDGKTcIAKKKTLVFHNGRHPG-EKTNWVIHEYYV 134
                     99555449999******999986.9*********76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.31E-428155IPR003441NAC domain
PROSITE profilePS5100545.32511155IPR003441NAC domain
PfamPF023651.7E-2112133IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    Send to blast
MSNILPLPSK LPVGFRFHPT DEELINYFWK LKTTGKDAQV DHIIAEVDLC KWEPWDLPSQ  60
SRVQSDDTLW WFFCRRGPRP KRTTGTGYWK STGQDKDIKG KDGKTCIAKK KTLVFHNGRH  120
PGEKTNWVIH EYYVETDNAL LPHQRAYVVC RLKKKSNSTV KTPNGNEGQP SRDFTSDFEN  180
LTAQLEIPGV HGYPEQTLVD NWPEMSLQFP NGSLSYGADE SEECLDEFAD SLIVDPDENG  240
ETANNVVNIF SLQTSLKRAY FEDDPVSSDT DTDRVHRRNI SSSMFGSPDG SKRVRQMRMV  300
KTPGETLRTS VGEHARVETI DPLHSRFSEE DTSSDDLIEL IGEINCMSLV EKERPKSVVV  360
SREGHQRRIQ AQKKVSPPAM RGTKVREAAK HNSTAVEMPL MEKPSKESQN AGKMVVQSSK  420
VVEKHLKSAS CESSPVSKWK SFFTFEETSS LSRCSSKSPS EYCFNAVAGT ILFVAFVREL  480
VIYGSW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3swm_A5e-281116120174NAC domain-containing protein 19
3swm_B5e-281116120174NAC domain-containing protein 19
3swm_C5e-281116120174NAC domain-containing protein 19
3swm_D5e-281116120174NAC domain-containing protein 19
3swp_A5e-281116120174NAC domain-containing protein 19
3swp_B5e-281116120174NAC domain-containing protein 19
3swp_C5e-281116120174NAC domain-containing protein 19
3swp_D5e-281116120174NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107124.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010107124.10.0uncharacterized protein LOC21402541
TrEMBLW9S4000.0W9S400_9ROSA; NAC domain-containing protein 69
STRINGXP_010107124.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF13478522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.12e-35NAC 014