PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010107113.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 452aa    MW: 51701.5 Da    PI: 6.4509
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010107113.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM146.51.4e-4521302128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                     ++GfrFhPtdeel+++yL++k+ g++ ++++vi+evd +k+ePwdLp + k+k++++ w fF+krd ky+++kr++r+tk+g+Wk tgk++ +++
  XP_010107113.1   2 AKGFRFHPTDEELITDYLRPKLLGRDSDVDDVIAEVDFCKFEPWDLPsQsKIKSKDRMWLFFCKRDYKYPSSKRSKRTTKEGFWKITGKERMIKD 96 
                     68********************************************96258899999*************************************9 PP

             NAM  95 k.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                     + +++ +g k+tLvf+kg +p  ++t+Wvmhey +
  XP_010107113.1  97 QeTKKCIGKKRTLVFHKGPTPG-QRTNWVMHEYYI 130
                     856666**********887775.9*********76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100550.0421150IPR003441NAC domain
SuperFamilySSF1019411.7E-473149IPR003441NAC domain
PfamPF023657.2E-243129IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    Send to blast
MAKGFRFHPT DEELITDYLR PKLLGRDSDV DDVIAEVDFC KFEPWDLPSQ SKIKSKDRMW  60
LFFCKRDYKY PSSKRSKRTT KEGFWKITGK ERMIKDQETK KCIGKKRTLV FHKGPTPGQR  120
TNWVMHEYYI EPHNLLPNQR SYVLCRLKEK ANDKANTPDS GEGNRSASEA ENPVTPAAIP  180
SAAHGNEVNQ ESFSQSLQSP VFTNEEISLP SPVGSSRDRN GMQAPYGAGE PEEPPEEMVD  240
RLIADSDADP YPKYYWESAY NPFNDRIPQA SSWSPYYVDG LVRSDTNTEG VNEQKHSSLF  300
NSPAGSNKFR HLQMDETTCG ELQCCYVSIR DQFSEEDDSY VNIASGGFST EESPNYVPFS  360
RRRCQRRIQL QDRDSSTAIS RNKVRESETH NSLSLSEYCF FPIKKRMWPE HHCLLDHARS  420
HAAAAMFAPP WHTGISGLPS QIAEWDATWC VS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A7e-31415020165NO APICAL MERISTEM PROTEIN
1ut4_B7e-31415020165NO APICAL MERISTEM PROTEIN
1ut7_A7e-31415020165NO APICAL MERISTEM PROTEIN
1ut7_B7e-31415020165NO APICAL MERISTEM PROTEIN
4dul_A7e-31415020165NAC domain-containing protein 19
4dul_B7e-31415020165NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010107113.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024028463.10.0protein NTM1-like 9
TrEMBLW9SKD10.0W9SKD1_9ROSA; NAC domain-containing protein 69
STRINGXP_010107113.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20652586
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.14e-50NAC transcription factor-like 9