PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010106034.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 490aa    MW: 55188.5 Da    PI: 5.4228
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010106034.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM52.91.2e-161711710128
             NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkk 104
                     +d+++v   L   ++g++l+  +vi++v+ y+++P+ Lp  v      w+f s++ +k          ++ gyW+++g+  +++s +++ +g + 
  XP_010106034.1  17 SDKDIV-TSLDGIISGSPLPS-NVISDVNPYQYKPSALP--V----GIWFFISSKMRKD---------ADFGYWRTKGEACRIFS-NSSITGWRS 93 
                     678888.55999999999999.99**************9..3....2477776665554.........578**************.999****** PP

             NAM 105 tLvfykgrapkgektdWvmheyrl 128
                     tL fy+g+ap+ +ktdWvm+ey +
  XP_010106034.1  94 TLEFYEGQAPHWHKTDWVMQEYWI 117
                     **********************75 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100521.9198140IPR003441NAC domain
SuperFamilySSF1019419.55E-2217139IPR003441NAC domain
PfamPF023655.2E-832115IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    Send to blast
MCPPAASPAS DIDLYCSDKD IVTSLDGIIS GSPLPSNVIS DVNPYQYKPS ALPVGIWFFI  60
SSKMRKDADF GYWRTKGEAC RIFSNSSITG WRSTLEFYEG QAPHWHKTDW VMQEYWITRK  120
ILSKDFNEKE NSLLCNVFFV GEQNPNPEKT WKMAEVDTAS QSTPVVVQKT ENHTGQGSTS  180
KRQINEGDGL PFIAVCEDND TEIVRTRERV SHNLVDIEHE TDYLPGGDFL ELLDLENPAS  240
PSSSSDSSCL TMSSDECFDA LDLLRDLESE KSHAQMQNNP DCKLSVFASS MPTEMVMYPA  300
STGTLDKPPN EEFLRSNRSI PGSASSIKIT DKKVLMNPDG KQKPDFRNEG APSTSRSGVV  360
SLSGDMAAPE EDRKAARGRM KKLKKKLFNL FFSFWFFEIQ FLVKIRTIWY QSSWWRFGIG  420
LSKFEIEKFT GKNDFALWRL KIRALLVQQG LEVALSGEKN LPTTLSEKEK KDLLDKAHSV  480
LILSLGDKVL
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010106034.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF0309865e-52KF030986.1 Morus indica microsatellite MSCP237-C sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024027738.10.0NAC domain-containing protein 7
RefseqXP_024027739.10.0NAC domain-containing protein 7
TrEMBLW9S3M10.0W9S3M1_9ROSA; NAC domain-containing protein 78
STRINGXP_010106034.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF105882235
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G65910.15e-13NAC domain containing protein 28