PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010104895.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 744aa    MW: 83035.9 Da    PI: 4.3737
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010104895.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM168.22.8e-5291431127
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                     lp GfrF+Ptdeel+++yL+ k++g++ ++ +vi+e+d++k ePwdLp +  +k+++ ew+fF++rd+ky++g+r+nrat++gyWkatgkd+++ 
  XP_010104895.1   9 LPLGFRFRPTDEELINHYLRLKINGRNADV-HVIPEIDVCKREPWDLPrQsVIKTDDPEWFFFCPRDRKYPNGQRSNRATDAGYWKATGKDRTIR 102
                     699************************999.99**************96347777888************************************* PP

             NAM  94 sk.......kgelvglkktLvfykgrapkgektdWvmheyr 127
                     s+       ++ l+g+kktLvfy+grapkge+t+W+mheyr
  XP_010104895.1 103 SRsyrsasnTNGLIGMKKTLVFYRGRAPKGERTNWIMHEYR 143
                     *988776655556***************************8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019415.36E-606167IPR003441NAC domain
PROSITE profilePS5100557.379167IPR003441NAC domain
PfamPF023653.7E-2710143IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045892Biological Processnegative regulation of transcription, DNA-templated
GO:0071470Biological Processcellular response to osmotic stress
GO:1900426Biological Processpositive regulation of defense response to bacterium
GO:0005634Cellular Componentnucleus
GO:0005789Cellular Componentendoplasmic reticulum membrane
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0005516Molecular Functioncalmodulin binding
Sequence ? help Back to Top
Protein Sequence    Length: 744 aa     Download sequence    Send to blast
MGTVSLESLP LGFRFRPTDE ELINHYLRLK INGRNADVHV IPEIDVCKRE PWDLPRQSVI  60
KTDDPEWFFF CPRDRKYPNG QRSNRATDAG YWKATGKDRT IRSRSYRSAS NTNGLIGMKK  120
TLVFYRGRAP KGERTNWIMH EYRPTLKDLD GTGPGQEAFV LCRLFRKPEE KSDALKHDEV  180
NQTGSSPTIT KSSPDDTSSD LLQETAPSDM PIGEEPEVIN RWSTEKLDIM IARAPGPVES  240
GSNSNMASDV EDHATDQETP REVHMQMEEN SQLYEPANDE IDFSSFSPFQ SIDLGPELLY  300
VGSPSDFGND INGFRFMDGT GEQDISISEL LDEVLQNPDE SSCEDSTYQK NTVVGRDNHL  360
SNLTQSLQNT QPGNLYNVSY NNMNPQTMQH GLDMKGSEWY SEQMDAKEVL QIQPQCGPSR  420
AEAPYANQDL RMGNMGQPGY NMVGQVSVNN LEESTSMNVP VNYYGHGGGT GIKIRSRQPQ  480
RPISDNFVTQ GTAARRIRLQ MDLSPGSTTN DNVRDSNQSY EEEVQSTHTG VSEATEWSPT  540
VDGQEKEYSR GHLAAGTGIK MRTRQQPQSS SNSPIPQGSA PRRIRLQMDT APRSFANDNV  600
KDVKQSKEED EDELQSTVTE DSLEDADDSE TDDEAQSSST EAPEATERSH FLDERDNESH  660
LLKADTIKEI AEESSIELID ESEDSSEESS AELVEANHKV CEKSTTKLSD FLSSVVPNPY  720
LCTTTTVAVN PSLITIGCGS MTRF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A6e-44816716165NO APICAL MERISTEM PROTEIN
1ut4_B6e-44816716165NO APICAL MERISTEM PROTEIN
1ut7_A6e-44816716165NO APICAL MERISTEM PROTEIN
1ut7_B6e-44816716165NO APICAL MERISTEM PROTEIN
3swm_A6e-44816719168NAC domain-containing protein 19
3swm_B6e-44816719168NAC domain-containing protein 19
3swm_C6e-44816719168NAC domain-containing protein 19
3swm_D6e-44816719168NAC domain-containing protein 19
3swp_A6e-44816719168NAC domain-containing protein 19
3swp_B6e-44816719168NAC domain-containing protein 19
3swp_C6e-44816719168NAC domain-containing protein 19
3swp_D6e-44816719168NAC domain-containing protein 19
4dul_A6e-44816716165NAC domain-containing protein 19
4dul_B6e-44816716165NAC domain-containing protein 19
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00108PBMTransfer from AT4G35580Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010104895.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024026857.10.0protein NTM1-like 9 isoform X1
TrEMBLW9RPS10.0W9RPS1_9ROSA; NAC domain-containing protein 78
STRINGXP_010104895.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF136251825
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35580.11e-134NAC transcription factor-like 9