PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103818.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 267aa    MW: 30576.3 Da    PI: 6.4226
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103818.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.31.5e-1939935128
             NAM  35 kevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykg..rapkgektdWvmhey 126
                     +++ + ++ P+++  k+k + +  wyfF+++ +k ++g+r+nr++k+gyW+   ++    +++g+++g k  L+f++   + ++ +ktdW+mhe+
  XP_010103818.1   3 ADIPLSEYTPEEIAVKYKPQVEgTWYFFTQKVRKFNKGQRRNRVAKNGYWRLANTTDVYSNNNGNKIGSKSLLAFHRVipSVKDYKKTDWIMHEF 97 
                     567788999****96666665669***************************88776555555999***********7644677788********9 PP

             NAM 127 rl 128
                      l
  XP_010103818.1  98 LL 99 
                     76 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100527.6811131IPR003441NAC domain
SuperFamilySSF1019413.66E-206130IPR003441NAC domain
PfamPF023655.4E-102197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MMADIPLSEY TPEEIAVKYK PQVEGTWYFF TQKVRKFNKG QRRNRVAKNG YWRLANTTDV  60
YSNNNGNKIG SKSLLAFHRV IPSVKDYKKT DWIMHEFLLP NSDQKKKSVG VGEEDMIKHD  120
DGYVLCRMYM RCCSKTNVKK ARRRSNKNAE TRILPHNVET APAASEYHAH DIDDQNAMLL  180
SMTPDHIDHE AITVVENPSS TTVSGENHDL GGLSSDTIPN AVASAAAADD DDDEFTAFLS  240
QYTFFFGDNY YYTQLMENFP STMMFWF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A3e-142413470168NO APICAL MERISTEM PROTEIN
1ut4_B3e-142413470168NO APICAL MERISTEM PROTEIN
1ut7_A3e-142413470168NO APICAL MERISTEM PROTEIN
1ut7_B3e-142413470168NO APICAL MERISTEM PROTEIN
3swm_A4e-142413473171NAC domain-containing protein 19
3swm_B4e-142413473171NAC domain-containing protein 19
3swm_C4e-142413473171NAC domain-containing protein 19
3swm_D4e-142413473171NAC domain-containing protein 19
3swp_A4e-142413473171NAC domain-containing protein 19
3swp_B4e-142413473171NAC domain-containing protein 19
3swp_C4e-142413473171NAC domain-containing protein 19
3swp_D4e-142413473171NAC domain-containing protein 19
4dul_A3e-142413470168NAC domain-containing protein 19
4dul_B3e-142413470168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103818.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010103818.20.0NAC transcription factor 56
TrEMBLW9RV010.0W9RV01_9ROSA; NAC domain-containing protein 55
STRINGXP_010103818.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15510.11e-14NAC domain containing protein 2