PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103498.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 366aa    MW: 39903.9 Da    PI: 7.6942
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103498.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.60.00088147169123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+++F++   L  H  +H
  XP_010103498.1 147 YECKTCNRTFPSFQALGGHRASH 169
                     99**********99999998887 PP

2zf-C2H2130.00031240262123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F++   L  H+r+H
  XP_010103498.1 240 HECSICGAEFTSGQALGGHMRRH 262
                     78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF139123.5E-13146171IPR007087Zinc finger, C2H2
SuperFamilySSF576671.74E-7146169No hitNo description
SMARTSM003550.052147169IPR015880Zinc finger, C2H2-like
PROSITE profilePS5015710.637147174IPR007087Zinc finger, C2H2
PROSITE patternPS000280149169IPR007087Zinc finger, C2H2
SuperFamilySSF576671.74E-7235262No hitNo description
PfamPF139125.5E-13239264IPR007087Zinc finger, C2H2
PROSITE profilePS501579.827240267IPR007087Zinc finger, C2H2
SMARTSM003550.01240262IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280242262IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MEATAQEEVN PTSKDHTVVA KGKRTKRQRP QSPMPFAAVA AATNSYGGEY NNNHHNSNSN  60
NSNNSSSPTT SAELQDISTE EEEDMANCLI LLAQGRFRGR SATPTKALPP IVIDTEDGSG  120
SAFKYSSRKF LEATNAPGAG RAGYYVYECK TCNRTFPSFQ ALGGHRASHK KPKAMAEIEK  180
KTQLFALQSD DEDQLQLTKS NHNTISSTTL SLQLNNRSLY GISHNNNNHH ITNKSPNKVH  240
ECSICGAEFT SGQALGGHMR RHRAPAGTVA ATAAAATALS LSTVSATPLM ALEAHEDDHQ  300
QQHTKKARNV LSLDLDLNLP APEDDQRDSK FGFVTSKQQQ QQQQQQQQQQ QSSLVFSAPA  360
LVDCHY
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00487DAPTransfer from AT5G04390Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103498.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010103498.10.0zinc finger protein ZAT5
TrEMBLW9RU530.0W9RU53_9ROSA; Zinc finger protein ZAT5
STRINGXP_010103498.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.12e-73C2H2 family protein