PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010103380.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TCP
Protein Properties Length: 235aa    MW: 25949.6 Da    PI: 4.5264
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010103380.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP67.25.8e-2111052298
             TCP  22 vRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...............ssssaseceaesssssasnsssg............. 88 
                     +Rls+++a++fFdLq+ LGf ++skt+eWLl++a  +ik+l ++               +s+++++ce             g             
  XP_010103380.1   1 MRLSIDVAREFFDLQELLGFERASKTVEWLLRKARSEIKKLKDSnneggcsstcpemqtPSPNSESCE-------------Gasgldevginged 82 
                     8*******************************************777766655555543333333332.............02222233333333 PP

             TCP  89 ................kaaksaaksk 98 
                                     +   s+++++
  XP_010103380.1  83 qgvagtssskplinqpA---SNKSEE 105
                     44444444444443221...111111 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036341.7E-201112IPR005333Transcription factor, TCP
PROSITE profilePS5136922.627141IPR017887Transcription factor TCP subgroup
Sequence ? help Back to Top
Protein Sequence    Length: 235 aa     Download sequence    Send to blast
MRLSIDVARE FFDLQELLGF ERASKTVEWL LRKARSEIKK LKDSNNEGGC SSTCPEMQTP  60
SPNSESCEGA SGLDEVGING EDQGVAGTSS SKPLINQPAS NKSEEKQQTG DQLPNQNMMD  120
IDMNNNIVIP NSSLGAVMQV SRYDQRYEFS QEILPISNPN GWNIFQVSNH DHIRQTSTTS  180
TGTTAPIVDY ETYSYLVNHL EKWNNSLVAN SVSNVGTTSG ATGFRVPQQG DYRVF
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010103380.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024028427.16e-94transcription factor TCP10
TrEMBLW9RL101e-175W9RL10_9ROSA; Uncharacterized protein
STRINGXP_010103380.11e-176(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18550.21e-15TCP family protein