PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010102188.1
Common NameDREB2D
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 199aa    MW: 22062.2 Da    PI: 5.34
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010102188.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.72.2e-164290355
             AP2  3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                    + GVr++  +g+WvAeIr+p   + r +r +lg+f t  eAa a++ a+ kl+g
  XP_010102188.1 42 FIGVRQRT-WGKWVAEIREP---N-RgARLWLGTFNTSTEAALAYDDAATKLYG 90
                    78***999.**********8...3.35***********************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000185.65E-274099No hitNo description
PROSITE profilePS5103220.4154198IPR001471AP2/ERF domain
SuperFamilySSF541713.47E-204199IPR016177DNA-binding domain
SMARTSM003805.0E-3141104IPR001471AP2/ERF domain
PfamPF008476.7E-124290IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.7E-284299IPR001471AP2/ERF domain
PRINTSPR003674.2E-84253IPR001471AP2/ERF domain
PRINTSPR003674.2E-86480IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010200Biological Processresponse to chitin
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 199 aa     Download sequence    Send to blast
MEDREKDQTA KAVVKAARPV MERSRKRRMK GKGGPENAEC TFIGVRQRTW GKWVAEIREP  60
NRGARLWLGT FNTSTEAALA YDDAATKLYG TSAKLNLPDR HHRLEPSSAA NQDAGSRLQP  120
LVMDNGFTTT SSSTTATNVN HDDDDNNNNI NNNNNNNMPI FGWPEICQVG SEDFGVLFGG  180
EDDQFVDSNN IGFPSPWSL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A8e-1742100665ATERF1
3gcc_A8e-1742100665ATERF1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
12328SRKRRM
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00519DAPTransfer from AT5G18450Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010102188.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783900.0KF678390.1 Morus notabilis dehydration responsive element binding transcription factor (DREB2D) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010102188.11e-148dehydration-responsive element-binding protein 2D
TrEMBLW6FHL31e-146W6FHL3_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010102188.11e-147(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF25623380
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75490.15e-34ERF family protein