PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098815.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family C2H2
Protein Properties Length: 303aa    MW: 33023.7 Da    PI: 8.3157
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098815.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.70.00081120142123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     y+C+ C+++F++   L  H  +H
  XP_010098815.1 120 YQCKTCDRCFPSFQALGGHRASH 142
                     9***********99999998887 PP

2zf-C2H213.30.00025208230123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C++Cg  F++   L  H+r+H
  XP_010098815.1 208 HECSICGAEFTSGQALGGHMRRH 230
                     78********************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576676.19E-9119142No hitNo description
PfamPF139121.3E-10119144IPR007087Zinc finger, C2H2
PROSITE profilePS501579.993120147IPR007087Zinc finger, C2H2
SMARTSM003550.077120142IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280122142IPR007087Zinc finger, C2H2
SuperFamilySSF576676.19E-9203230No hitNo description
Gene3DG3DSA:3.30.160.600.001206230IPR013087Zinc finger C2H2-type/integrase DNA-binding domain
PfamPF139126.7E-13207232IPR007087Zinc finger, C2H2
PROSITE profilePS501579.723208230IPR007087Zinc finger, C2H2
SMARTSM003550.01208230IPR015880Zinc finger, C2H2-like
PROSITE patternPS000280210230IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003676Molecular Functionnucleic acid binding
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MEAQEDYNQL MIKQMTIKGK RTKRHRAQPH GPVSSLVLSI APSSSSSSGG AGGLALLDGV  60
STSSSDDQSA EIISRTEEED MANCLILLAQ GRDRHDHHGD RDGPRNSEPA AVRHANDVVY  120
QCKTCDRCFP SFQALGGHRA SHKKPKGNNS AAEEKKTSFF LVEDHEQFVS SATSTTLSLQ  180
MSSRGILRNG NNRISVSNTN NSNKAKVHEC SICGAEFTSG QALGGHMRRH RATSFMTAPT  240
TLSVGTTSSS DHQSRESKKP RNVLQLDLNL PALDDDRRET KFPFSSKEQV IVFAASPLVD  300
CHY
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098815.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010098815.10.0zinc finger protein ZAT5
TrEMBLW9R8C90.0W9R8C9_9ROSA; Zinc finger protein ZAT5
STRINGXP_010098815.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03510.13e-52C2H2 family protein