PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010098471.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 386aa    MW: 42919.2 Da    PI: 9.4542
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010098471.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix56.47.6e-1821105272
        trihelix   2 WtkqevlaLiearremeerlrrgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                     Wt +e++ Liea++ ++er  +++               ++ +W++v ++++++g+ rs++qC++kw+nl ++ykk+++ e+k  
  XP_010098471.1  21 WTVSETMILIEAKKMDDERRMKRStgndseggsirinkPAELRWKWVEDYCWRKGCMRSQNQCNDKWDNLMRDYKKVRDYERKVM 105
                     *************966666554333556666667776699*****************************************9964 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS500906.8991391IPR017877Myb-like domain
PfamPF138378.4E-1320103No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    Send to blast
MADNQGAATT SLMRDYRKGN WTVSETMILI EAKKMDDERR MKRSTGNDSE GGSIRINKPA  60
ELRWKWVEDY CWRKGCMRSQ NQCNDKWDNL MRDYKKVRDY ERKVMADHQG ISTSSATDQS  120
YWKLEKNERK DKNLPTNMLP QIYEALVEVV EKKPPRALAA LVPITSTPPA TVVGYNVVER  180
IIGGGGGSGR GSGTSIIHHH QQQTPLVASA QALLQHHISP SPITALPLPP AVPAAPSPMQ  240
AQPLPYPQPI LPTVDSDTSE NPSPHSPAKR RRKTDQQQQQ QQQQEQGTTS ASARISTGTS  300
SSNHEVAFAI SKSASIIAEA LQACEEREER RHRDLLSLHE RRLKIEESKT EVNRQGINGL  360
VDAINNLANS IQALASDKHQ STSKPS
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010098471.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024022806.10.0uncharacterized protein LOC21408586
TrEMBLW9R7D10.0W9R7D1_9ROSA; Uncharacterized protein
STRINGXP_010098471.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF68043242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-61Trihelix family protein