PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010096921.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 376aa    MW: 42286.3 Da    PI: 4.7172
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010096921.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM100.72e-31291562128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     ppG+rF P+deel+++yL +k +++ +e + +i+e+ + ++ P+++ +k+k + +  wyfF+ + +k+++gkr+nr + +gyW+   ++++v+s 
  XP_010096921.1  29 PPGYRFAPSDEELIMYYLIPKSQDQIFEPNCIISEITLSDYTPEEIAEKYKPQVEgTWYFFTLKVRKSNNGKRRNRLAGDGYWRLA-NTTDVYSD 122
                     9*************************999788**************97776666669**************************976.55899999 PP

             NAM  96 kgelvglkktLvfykg.rapkgektdWvmheyrl 128
                     +g ++g k  L f++   + k ektdW+mhe+++
  XP_010096921.1 123 NGVKIGSKSLLGFHRViPNVKEEKTDWIMHEFSV 156
                     **************876778889*********85 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.75E-3322189IPR003441NAC domain
PROSITE profilePS5100535.54928189IPR003441NAC domain
PfamPF023656.9E-1929155IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 376 aa     Download sequence    Send to blast
MVVSETDHNY DQMEGYRVEE TAVLNYYCPP GYRFAPSDEE LIMYYLIPKS QDQIFEPNCI  60
ISEITLSDYT PEEIAEKYKP QVEGTWYFFT LKVRKSNNGK RRNRLAGDGY WRLANTTDVY  120
SDNGVKIGSK SLLGFHRVIP NVKEEKTDWI MHEFSVLPSL DRKRKLTTLG EEDMLKLEDG  180
YVLCQMYKRG STKTNKVLRR SNKNTELQIL PHNYVETAPA NLEYHAHDDH DQNSMLLSKT  240
PGRIDHGALT LVENPPSTSV SGENRNLGGL SSDGILGAVP PTAAADDGDE LTAFLLKALD  300
AEDYYYAQLM ENSLPTTATT SSSNITDVSP QKANDKDLVL RGLEEVNQLI SEFSNHISTP  360
IAPNWDTATT STTCCL
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-242919218168NO APICAL MERISTEM PROTEIN
1ut4_B2e-242919218168NO APICAL MERISTEM PROTEIN
1ut7_A2e-242919218168NO APICAL MERISTEM PROTEIN
1ut7_B2e-242919218168NO APICAL MERISTEM PROTEIN
3swm_A3e-242919221171NAC domain-containing protein 19
3swm_B3e-242919221171NAC domain-containing protein 19
3swm_C3e-242919221171NAC domain-containing protein 19
3swm_D3e-242919221171NAC domain-containing protein 19
3swp_A3e-242919221171NAC domain-containing protein 19
3swp_B3e-242919221171NAC domain-containing protein 19
3swp_C3e-242919221171NAC domain-containing protein 19
3swp_D3e-242919221171NAC domain-containing protein 19
4dul_A2e-242919218168NAC domain-containing protein 19
4dul_B2e-242919218168NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010096921.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010096921.20.0NAC transcription factor 56, partial
TrEMBLW9RRL80.0W9RRL8_9ROSA; NAC domain-containing protein 19
STRINGXP_010096921.10.0(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61110.12e-28NAC domain containing protein 25