PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095198.1
Common NameDREB2B
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 402aa    MW: 44260.9 Da    PI: 8.231
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095198.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.94.6e-1765114154
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 
                     + ++GVr++  +g+Wv+eIr p   + r  r +lg+f ta eAa a+++a+++++
  XP_010095198.1  65 CSFRGVRQRT-WGKWVSEIRAP---N-RgSRLWLGTFPTAIEAALAYDEAARAMY 114
                     579****999.**********8...3.35**********************9986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008473.5E-1165114IPR001471AP2/ERF domain
CDDcd000182.66E-2865124No hitNo description
Gene3DG3DSA:3.30.730.108.0E-3066124IPR001471AP2/ERF domain
PROSITE profilePS5103220.33666123IPR001471AP2/ERF domain
SMARTSM003804.8E-3366129IPR001471AP2/ERF domain
SuperFamilySSF541714.05E-1967123IPR016177DNA-binding domain
PRINTSPR003674.9E-96778IPR001471AP2/ERF domain
PRINTSPR003674.9E-989105IPR001471AP2/ERF domain
PROSITE profilePS5147315.665182285IPR002902Gnk2-homologous domain
PfamPF016574.5E-15199281IPR002902Gnk2-homologous domain
PROSITE profilePS5147319.313292397IPR002902Gnk2-homologous domain
PfamPF016572.5E-13307394IPR002902Gnk2-homologous domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    Send to blast
MPRLENRHSR GDGSKSLAET LAKWREYNDR LYSTEGVHKP IPRVPAKGSK KGCMKGKGGP  60
ENSRCSFRGV RQRTWGKWVS EIRAPNRGSR LWLGTFPTAI EAALAYDEAA RAMYSSCARL  120
NFPNISISVS GLQKDSPSVA TPSVSSSQAT PAGSEFSGTP NNLEDCAGEE VVKPVSNNTQ  180
IEAAIHPALG AYPLTHICSD FETSLRKLIS YLSFQTPPTV FGIFGTGQIF DEAYGFALCR  240
GDLFPTDCAR CVIEASEEIL RLCPYKPDAA IWYDHCLRRY HSNDIFGKID TQRVPRFASA  300
ASIGENEVAF SESTRRLLGG LSQNASVDRN LYASDEIAID DSRKIHGMAQ CTRDLSKSEC  360
KRCLDHLVDS AVGCCSGKRG VRIISASCYL RYELYPFSNI SY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6grf_A2e-1620139224211Cysteine-rich repeat secretory protein 15
6grf_B2e-1620139224211Cysteine-rich repeat secretory protein 15
6grf_C2e-1620139224211Cysteine-rich repeat secretory protein 15
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010095198.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6784000.0KF678400.1 Morus notabilis dehydration responsive element binding transcription factor (DREB2B) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095198.10.0cysteine-rich repeat secretory protein 38
TrEMBLW6FHL70.0W6FHL7_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010095198.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF117534106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05410.22e-32DRE-binding protein 2A