PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010091375.1
Common NameDREB5C
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family ERF
Protein Properties Length: 258aa    MW: 28381.3 Da    PI: 5.8679
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010091375.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-182776255
             AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                    +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ tae Aa+a++aa ++l+g
  XP_010091375.1 27 KYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTAEAAARAYDAALLCLKG 76
                    8*****998.**********9...336************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.41E-182784No hitNo description
SuperFamilySSF541715.82E-202786IPR016177DNA-binding domain
SMARTSM003803.4E-342790IPR001471AP2/ERF domain
PROSITE profilePS5103221.8382784IPR001471AP2/ERF domain
PfamPF008472.2E-112776IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.102.3E-302786IPR001471AP2/ERF domain
PRINTSPR003676.4E-92839IPR001471AP2/ERF domain
PRINTSPR003676.4E-95066IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0009753Biological Processresponse to jasmonic acid
GO:0034605Biological Processcellular response to heat
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0071497Biological Processcellular response to freezing
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 258 aa     Download sequence    Send to blast
MVKIEKSPSK ARGNNSTPTS STPGKNKYKG VRMRSWGSWV SEIRAPNQKT RIWLGSYSTA  60
EAAARAYDAA LLCLKGSSAN LNFPTSTTTF SSSLQNDVPH DVVLSPKSIQ RFAAAAAAAV  120
TNTTTTTTTT TTTTANTTFV NDNNTLAIST LYNDLRSSSY SSSSSSSVVS SPSDQVDDDV  180
SLMGSLDGTR MNNDNNYDHH QQPMAMMESW PFDALIHEYS PKYVDHHDHQ MLTSLMFDPQ  240
MLVEDPYEES DIRLWSFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1426841372Ethylene-responsive transcription factor ERF096
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00156DAPTransfer from AT1G21910Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010091375.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF6783770.0KF678377.1 Morus notabilis dehydration responsive element binding transcription factor (DREB5C) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010091375.10.0ethylene-responsive transcription factor ERF014
TrEMBLW6FG870.0W6FG87_9ROSA; Dehydration responsive element binding transcription factor
STRINGXP_010091375.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF47983156
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G21910.13e-29ERF family protein