PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v1.0, v2.0, v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010090274.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family GeBP
Protein Properties Length: 364aa    MW: 40855.3 Da    PI: 4.9123
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010090274.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57377.13e-24100203497
          DUF573   4 qrlwseeDeivlLqGlidfkaktgk.....spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.....aksgkepsfskehdqki 88 
                     +r+w++eDe+ lL G++d  +k+       +++d ++ f++ vk +++++++ksq+v+K+rrLK+K++++ ++      + ++++ f+++hd+ +
  XP_010090274.1 100 KRVWTKEDELELLHGFLDHMTKRRRitssrKQKDYVSSFCNEVKPELQIRFNKSQIVDKLRRLKRKYNQNIANkrslsLDMQDQFWFKNPHDKAA 194
                     8******************8887766654334446789*******************************9988777777889999********** PP

          DUF573  89 felskkiWg 97 
                     fe+s+ iW+
  XP_010090274.1 195 FEISHEIWN 203
                     ********8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045041.3E-21100203IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 364 aa     Download sequence    Send to blast
MEMAWPLVSW IMSASSSSSS SSSEYDDNND DSDYNDDDNE AESPNDDVSC DDSVSPSTQS  60
PCQPPSSTVA AAVAADPSSS TSKRRRTDDS GEAVKRVSKK RVWTKEDELE LLHGFLDHMT  120
KRRRITSSRK QKDYVSSFCN EVKPELQIRF NKSQIVDKLR RLKRKYNQNI ANKRSLSLDM  180
QDQFWFKNPH DKAAFEISHE IWNTTDRLGT GDQDQTVVDD NVPIRTRSQT LRNSTTKGVL  240
DDGSWLNKIN NSNNSCGDEG SDTVGLIMGL GLSPIGLMKF GDGGEVVNFH DEKWGEQQIM  300
ELEVYLKRLE LVQAQVKAAL DKLRSAGSGK DVTLFAKAFY TDDVAAMETK RLFFFVVFQL  360
EGGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120124KRRRI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010090274.10.0hypothetical protein L484_006181
TrEMBLW9QKH70.0W9QKH7_9R
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32553365
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28040.14e-32DNA-binding storekeeper protein-related transcriptional regulator