PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010089907.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family NAC
Protein Properties Length: 227aa    MW: 26354.9 Da    PI: 6.1442
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010089907.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.13.7e-32101372128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykvePwdLpkkvka.eekewyfFskrdkkyatgkrknr.atk..sgyWkatgkdke 91 
                     p G+rF+Pt+ elv++yL++kv +k+++  +  ++e+++y++ P++L++k+   +e+e+y F+kr  k+++gkr +r +t+  +g+Wka+  + +
  XP_010089907.1  10 PIGIRFSPTEVELVDYYLANKVMNKPFQDPTNrFQELELYNYTPKKLQEKYGVqKEHEMYIFVKRVLKHQKGKRLQRrITDgsNGFWKASTGEVK 104
                     89************************7775555**************965544156699***************98856657799***9999999 PP

             NAM  92 vlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                     +   +g lvg ++tLv+yk    +gekt+W+m eyrl
  XP_010089907.1 105 IEL-DGVLVGHRRTLVYYK---GEGEKTNWLMYEYRL 137
                     *99.9*************5...56788********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.01E-374155IPR003441NAC domain
PROSITE profilePS5100536.6659156IPR003441NAC domain
PfamPF023653.2E-1910137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MEITPVNLFP IGIRFSPTEV ELVDYYLANK VMNKPFQDPT NRFQELELYN YTPKKLQEKY  60
GVQKEHEMYI FVKRVLKHQK GKRLQRRITD GSNGFWKAST GEVKIELDGV LVGHRRTLVY  120
YKGEGEKTNW LMYEYRLPDH YFVQLGDWLL CKVYLNEKKE TILNSNNVDV GQEAASAGAF  180
VGRPPDTSSF SASQWTGEQF TAMITSESDI NLPDWDKITI CWDDSTT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-20916015171Stress-induced transcription factor NAC1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010089907.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_024017054.11e-116NAC transcription factor 29
TrEMBLW9QUB41e-170W9QUB4_9ROSA; NAC domain-containing protein 29
STRINGXP_010089907.11e-171(Morus notabilis)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69490.12e-27NAC-like, activated by AP3/PI