PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010087414.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family TCP
Protein Properties Length: 555aa    MW: 59050.4 Da    PI: 7.8858
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010087414.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP123.32.8e-38159270389
             TCP   3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg........ 88 
                     + k++++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++  + s +ss+s+ s++        
  XP_010087414.1 159 PVKRSTKDRHTKVDGRGRRIRMPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNISLRSSGSTLSAPpsksaphs 253
                     6799****************************************************************999877777777775444433333333 PP

             TCP  89 ................k 89 
                                     +
  XP_010087414.1 254 fhgalalaaahhhhhfD 270
                     33333333333333330 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF036343.8E-40163315IPR005333Transcription factor, TCP
PROSITE profilePS5136928.496164218IPR017887Transcription factor TCP subgroup
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0001047Molecular Functioncore promoter binding
Sequence ? help Back to Top
Protein Sequence    Length: 555 aa     Download sequence    Send to blast
MDLADLQSNK QNTSNTNNSA RQQNQLLLHH HHHHHQQQQK QSSSSSSPQF VVPFDGRSSS  60
SGGGQGPPFM GSISIQAGLT ATAGTTSSSS SSSSSSSSSS TSTSTAPPHL VDASLAIATR  120
STPLVDSSKV KNNNSNNNNN DNLNQQQQQQ QLSIVPPPPV KRSTKDRHTK VDGRGRRIRM  180
PATCAARVFQ LTRELGHKSD GETIEWLLQQ AEPAIIAATG TGTIPANFST LNISLRSSGS  240
TLSAPPSKSA PHSFHGALAL AAAHHHHHFD EAGFAHAGLL GFHPQQNQQN QQTLMAEALP  300
SGDNNNNNGG GGGETTENYM RKRFREDLFK DDNSSSQSQQ QGEESSSSPS NKTFKQMPNK  360
QDPAAGSSAG LLRPSNLLPP TAMWAVAPSS GAGSTFWMLP VTAGTGVSPV APATSEQPHM  420
WTFPTPPPSH GSTLQAPLHF MPRFNLPGGI DFQGGGRGSQ LQLGSMLMQQ HPGAAAAQPP  480
QPSQQLGLGV SESNLGMLAA LNAYSRGGLN INSDHHQSHP LEHHQHQHQH QHQHQHQQHQ  540
SQATNSGDED PNNSQ
Cis-element ? help Back to Top
SourceLink
PlantRegMapXP_010087414.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010087414.10.0transcription factor TCP8
TrEMBLW9QDC00.0W9QDC0_9ROSA; Uncharacterized protein
STRINGXP_010087414.10.0(Morus notabilis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF60773050
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G58100.16e-66TCP family protein