PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N02926.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 136aa    MW: 15027.9 Da    PI: 6.2638
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N02926.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2507.5e-162871148
               AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaia 48
                      ++y GVr+++ +gr++AeIr p     +   r++lg+f+taeeAa a++ 
  Migut.N02926.1.p 28 TKYLGVRRRP-WGRFAAEIRNP-----HtkERHWLGTFDTAEEAAVAYDI 71
                      699*******.**********7.....336******************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000181.13E-262886No hitNo description
PfamPF008474.0E-92870IPR001471AP2/ERF domain
PROSITE profilePS5103220.5212987IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.5E-252986IPR001471AP2/ERF domain
SMARTSM003806.4E-282993IPR001471AP2/ERF domain
SuperFamilySSF541719.81E-182987IPR016177DNA-binding domain
PRINTSPR003676.1E-93041IPR001471AP2/ERF domain
PRINTSPR003676.1E-95268IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MELIPDSDKQ HQMIRNPAGM SKSSRSSTKY LGVRRRPWGR FAAEIRNPHT KERHWLGTFD  60
TAEEAAVAYD ISSISFSGVE KARTNFVYPF LGSPPPPPAV EESGLKSTEE DDESVLIASI  120
LQSFSQSNGL DKMLL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-1529931479Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N02926.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012838243.11e-87PREDICTED: ethylene-responsive transcription factor LEP-like
TrEMBLA0A022RCA38e-53A0A022RCA3_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.14e-29ERF family protein