PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00927.1.p
Common NameMIMGU_mgv1a026015mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family GRAS
Protein Properties Length: 625aa    MW: 71249.2 Da    PI: 4.8659
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00927.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS2483.7e-762046171373
              GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaal.......... 81 
                       lv+lLl++A+ + +++    la++++     +as +g+p+qR+  yf++AL++++  +++  ++  + ++ ++++++e+   +          
  Migut.N00927.1.p 204 LVHLLLDAADKLGTRHRFldLATKIILLCLGIASDSGSPIQRVSYYFAQALQHKIDTESNINSNNYKKKKLHQQEQQEQQEQQqqqqqqqqqq 296
                       6899******99886654449******99**************************98443333333444443333222222223457789999 PP

              GRAS  82 ...............................klfsevsPilkfshltaNqaIleav....egeervHiiDfdisqGlQWpaLlqaLasRpegp 139
                                                       + ++  P+ ++ +++a qaI + v    ++e ++H iD++i  G+QW aL+q L +   + 
  Migut.N00927.1.p 297 qqqqqqqqqqqqqqqqqqeikslalgtnntfLTTHQQLPFAQVMQFAAVQAIIDNVvimkSTEGKIHLIDLQIRSGIQWTALMQGLVD-YYPI 388
                       ***********************999997554467889****************8744334569***********************9.5899 PP

              GRAS 140 pslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvk 232
                         l+iT+vg   s++++ +eetg+rL  f ++l++pf+f++l+ k++++++ + L+++ +E+++V + ++l ++ +++   e+    +++++ 
  Migut.N00927.1.p 389 QCLKITAVGT--SDQRHCIEETGKRLITFSKSLNLPFSFEILYLKDMSEFKEDLLNIEADETVVVYSYMMLRTMISRPDLFEN----LMRAIT 475
                       9*********..66************************************************************966666666....****** PP

              GRAS 233 slsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFk 325
                       +l+P ++ v+e ea+hns+ F +rf+eal +y+a+fd+le+ + r +e r+ +E  ++g+ i+n+va+eg+er+ r+ +l  Wr+ ++++G+ 
  Migut.N00927.1.p 476 RLRPALMLVIEVEANHNSPLFIDRFIEALVFYTAFFDCLESCMERSNEYRRELESTYFGEGITNIVAAEGEERVTRNVKLDVWRAFFTRFGMV 568
                       ********************************************************************************************* PP

              GRAS 326 pvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaW 373
                       + +lse+a  qa+l+l+k++ +   ++e++ + l+ gWk+ p  s++aW
  Migut.N00927.1.p 569 ETELSESAKYQASLVLNKFAhGSSCTLECDGKGLIVGWKGTPFHSLTAW 617
                       ********************8888************************* PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5098538.597178597IPR005202Transcription factor GRAS
PfamPF035141.3E-73204617IPR005202Transcription factor GRAS
Gene3DG3DSA:2.60.200.202.2E-4282317IPR000253Forkhead-associated (FHA) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 625 aa     Download sequence    Send to blast
MPDVIFSLDG DNYDPLPAAY VVRDGSDDQQ DPIFVENGFM DFFSLLFGQQ QQQQQQEDNP  60
ILDHKQIARD DDWTMQPQRK LFTKQYVNHE NQYSFALASL DLLNINYGKG FSRSMTRSSE  120
YNIYNDLMMM NTVVGAGAGA GTGIGTDAGG HKLPVEEILR VGGERFIQFS SNRVDGISTF  180
IHPYYNNGSS LSGLSVDDAR DVELVHLLLD AADKLGTRHR FLDLATKIIL LCLGIASDSG  240
SPIQRVSYYF AQALQHKIDT ESNINSNNYK KKKLHQQEQQ EQQEQQQQQQ QQQQQQQQQQ  300
QQQQQQQQQQ QQQQEIKSLA LGTNNTFLTT HQQLPFAQVM QFAAVQAIID NVVIMKSTEG  360
KIHLIDLQIR SGIQWTALMQ GLVDYYPIQC LKITAVGTSD QRHCIEETGK RLITFSKSLN  420
LPFSFEILYL KDMSEFKEDL LNIEADETVV VYSYMMLRTM ISRPDLFENL MRAITRLRPA  480
LMLVIEVEAN HNSPLFIDRF IEALVFYTAF FDCLESCMER SNEYRRELES TYFGEGITNI  540
VAAEGEERVT RNVKLDVWRA FFTRFGMVET ELSESAKYQA SLVLNKFAHG SSCTLECDGK  600
GLIVGWKGTP FHSLTAWNFS SYNS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5hyz_A6e-2623661833375GRAS family transcription factor containing protein, expressed
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00927.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011082627.10.0DELLA protein RGL1-like
TrEMBLA0A022REM60.0A0A022REM6_ERYGU; Uncharacterized protein
STRINGMigut.N00927.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46941842
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17490.13e-41RGA-like protein 3