PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.N00263.1.p
Common NameMIMGU_mgv1a020610mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 136aa    MW: 15220.7 Da    PI: 6.1323
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.N00263.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.88.8e-212475256
               AP2  2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkklege 56
                      +y+GVr ++ +g+++AeIrd    g + +r++lg+fgtaeeAa+a+++a+ +++g+
  Migut.N00263.1.p 24 KYRGVRKRP-WGKYAAEIRDT---GrQGARVWLGTFGTAEEAARAYDRAAYSMKGH 75
                      8********.**********4...5445*************************997 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008475.8E-162475IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.7E-312484IPR001471AP2/ERF domain
CDDcd000185.66E-182483No hitNo description
SuperFamilySSF541712.42E-222483IPR016177DNA-binding domain
SMARTSM003801.2E-322488IPR001471AP2/ERF domain
PROSITE profilePS5103223.0512482IPR001471AP2/ERF domain
PRINTSPR003671.4E-112536IPR001471AP2/ERF domain
PRINTSPR003671.4E-114864IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MDDEGPSNRS EKGSGREKDA GEIKYRGVRK RPWGKYAAEI RDTGRQGARV WLGTFGTAEE  60
AARAYDRAAY SMKGHLAILN FPEEYNLPSS SSHFSTPGDH MHGGGGGGRE VFEFEYYDDK  120
LLEELLDDKR EKKRD*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-342412114114Ethylene-responsive transcription factor ERF096
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.N00263.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012843103.14e-75PREDICTED: ethylene-responsive transcription factor 1B-like
SwissprotQ9LTC58e-40ERF98_ARATH; Ethylene-responsive transcription factor ERF098
TrEMBLA0A022R1722e-93A0A022R172_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23220.17e-25ERF family protein
Publications ? help Back to Top
  1. Van den Broeck L, et al.
    From network to phenotype: the dynamic wiring of an Arabidopsis transcriptional network induced by osmotic stress.
    Mol. Syst. Biol., 2017. 13(12): p. 961
    [PMID:29269383]