PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.M00859.1.p
Common NameMIMGU_mgv1a017888mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 343aa    MW: 38185.1 Da    PI: 6.6056
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.M00859.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.72.9e-18126176256
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                        y+GVr+++ +g+WvAeIr p++   r+r +lg+f ++eeAa a+++ + +l+ge
  Migut.M00859.1.p 126 LYRGVRQRH-WGKWVAEIRLPRK---RTRLWLGTFESPEEAAMAYDRQAFRLRGE 176
                       59******9.**********954...5**************************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000183.41E-33125184No hitNo description
Gene3DG3DSA:3.30.730.104.4E-31126184IPR001471AP2/ERF domain
PROSITE profilePS5103222.748126183IPR001471AP2/ERF domain
SuperFamilySSF541712.48E-22126185IPR016177DNA-binding domain
SMARTSM003801.6E-37126189IPR001471AP2/ERF domain
PfamPF008478.7E-13127176IPR001471AP2/ERF domain
PRINTSPR003674.0E-10127138IPR001471AP2/ERF domain
PRINTSPR003674.0E-10149165IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 343 aa     Download sequence    Send to blast
MEVGNLSSNT IQNQCDDSDA NNKPKPPREK RAAGLSTYTP PPPKKIRGSS TLAFPFALDD  60
DYCQPSTTAA VGLSFLERTR LNPKMISFSH HLHLQPLDYN SQSRDATNNG GGETTPPLPP  120
STPPKLYRGV RQRHWGKWVA EIRLPRKRTR LWLGTFESPE EAAMAYDRQA FRLRGESARL  180
NFPHRFRSNH YKPSDQIQPS PPPLISPSNN SSLISPATTK TTTNNHWFFL EEEPIRRDDR  240
DASPFTTSII NGANAVNYGE PSSSNNNHAK DIETGYHPII DPTYLSTDNY LSSGNDDFGY  300
QWLADLLDGL SDPIGISCST DEVFTADSLQ DNFRLDSNSS KS*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-20125188468ATERF1
3gcc_A1e-20125188468ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.M00859.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A022RWH90.0A0A022RWH9_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22190.14e-33ERF family protein