PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.K00605.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 389aa    MW: 42780.3 Da    PI: 6.995
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.K00605.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.72.5e-1751100255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +gr++AeIrdp     +  r +lg+f+taeeAa a++ a+++++g
  Migut.K00605.1.p  51 RYRGVRRRP-WGRYAAEIRDPQ----SkERRWLGTFDTAEEAACAYDCAARAMRG 100
                       59*******.**********93....35999**********************97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.2E-2951107IPR001471AP2/ERF domain
SuperFamilySSF541714.18E-2151108IPR016177DNA-binding domain
PfamPF008471.0E-1051100IPR001471AP2/ERF domain
SMARTSM003802.5E-3351114IPR001471AP2/ERF domain
PROSITE profilePS5103222.08951108IPR001471AP2/ERF domain
CDDcd000181.04E-2951107No hitNo description
PRINTSPR003672.2E-95263IPR001471AP2/ERF domain
PRINTSPR003672.2E-97490IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009733Biological Processresponse to auxin
GO:0009880Biological Processembryonic pattern specification
GO:0048825Biological Processcotyledon development
GO:0051726Biological Processregulation of cell cycle
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    Send to blast
MEEALRRLNG SLTRDSDPLL PPTAVPKRCS AATKRSLKDG PPAPSSAGTM RYRGVRRRPW  60
GRYAAEIRDP QSKERRWLGT FDTAEEAACA YDCAARAMRG VKARTNFVYP TSPPPPHHHH  120
HLYPTAAENL LPSFVTYAKS SSQPSILGGG NHHRHSFAPP SSFANPNLDF NGPSYRSGSN  180
SINMLLLRDY LNSTTTTKFS EPSSFNYDQI PLNFPATPND FMGSSSLTPR AATVDSTIVS  240
DVGFDNPISA APFADDDSME FFPTERSDSG LLQEVIHGFF PKAKPFASLP LSIKQENDEN  300
YVKYSNSDNG FLGFPVDGYY QRVQHPQYEN LNYSSSAFSG TERNCTEPHC SDHMSFPTAG  360
ANAPNGIFGD IFHYQEALNL FSAKVQNA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A2e-18511071471Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.K00605.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012845404.10.0PREDICTED: ethylene-responsive transcription factor ESR2-like
TrEMBLA0A022QVT00.0A0A022QVT0_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G24590.12e-18DORNROSCHEN-like