PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J01445.1.p
Common NameMIMGU_mgv1a010479mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family DBB
Protein Properties Length: 312aa    MW: 33736.6 Da    PI: 6.1698
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J01445.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box20.87.8e-072062438
          zf-B_box  4 rkCpeHeekelqlfCedCqqllCedClleeHkg........Ht 38
                      + C+ +++  + lfC+ ++ ++C  C  + H++        H+
  Migut.J01445.1.p 20 KPCDYCKSAAALLFCRVDSAFMCIPCDAKVHRSssaagglkHE 62
                      57*******9*********************877777777776 PP

2zf-B_box25.82.2e-0864108341
          zf-B_box   3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 
                        ++C+ +e+ ++   C+ +   lC +C   +H        H++v+
  Migut.J01445.1.p  64 VWMCEVCEQAPAVVTCKADAAALCVTCDRDIHAAnplasrHERVQ 108
                       689*****************************6678888898876 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003360.0691754IPR000315B-box-type zinc finger
PfamPF006439.8E-62063IPR000315B-box-type zinc finger
CDDcd000218.01E-72166No hitNo description
PROSITE profilePS501198.8872266IPR000315B-box-type zinc finger
PROSITE profilePS5011910.06862109IPR000315B-box-type zinc finger
SMARTSM003362.2E-1462109IPR000315B-box-type zinc finger
PfamPF006436.4E-664108IPR000315B-box-type zinc finger
CDDcd000212.70E-765109No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005622Cellular Componentintracellular
GO:0008270Molecular Functionzinc ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 312 aa     Download sequence    Send to blast
MGILQGAGKF FPAGLNVVAK PCDYCKSAAA LLFCRVDSAF MCIPCDAKVH RSSSAAGGLK  60
HERVWMCEVC EQAPAVVTCK ADAAALCVTC DRDIHAANPL ASRHERVQVV PFYDTAESVM  120
MKSTAAAALL LPPVGDCNHS SIFAAAAPPP PPPPPHMEQQ NAYIPDSWIS MNPIITAAKL  180
IPAENPDLKS MELLFQDSDQ FLDFDNYQIS SQPFTDSVVP IQTATIEPPV PARLGHEHSP  240
EDRFDIDFAG IQHQFIQQLH HPFTQPQCLV VVDGCGGGAG RKFHVGNILL VGADHQFERR  300
WLAGCRNGQR S*
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J01445.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012831316.10.0PREDICTED: LOW QUALITY PROTEIN: zinc finger protein CONSTANS-LIKE 5
TrEMBLA0A022RR510.0A0A022RR51_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA10352376
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24930.14e-45CONSTANS-like 4