PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.J00902.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family ERF
Protein Properties Length: 167aa    MW: 17858.9 Da    PI: 9.501
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.J00902.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.4e-201766255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                      +ykGVr +k +g+WvAe+r p++   r r++lg+++taeeAa+a++aa  +l+g
  Migut.J00902.1.p 17 RYKGVRMRK-WGKWVAEVRQPNS---RDRIWLGSYDTAEEAARAYDAAVVCLRG 66
                      69*****99.*******888732...5************************998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003802.1E-351780IPR001471AP2/ERF domain
CDDcd000184.27E-291776No hitNo description
Gene3DG3DSA:3.30.730.101.1E-301775IPR001471AP2/ERF domain
PROSITE profilePS5103223.3011774IPR001471AP2/ERF domain
SuperFamilySSF541712.75E-221775IPR016177DNA-binding domain
PfamPF008471.0E-131766IPR001471AP2/ERF domain
PRINTSPR003673.0E-101829IPR001471AP2/ERF domain
PRINTSPR003673.0E-104056IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 167 aa     Download sequence    Send to blast
MVRPQSSSKR SERREGRYKG VRMRKWGKWV AEVRQPNSRD RIWLGSYDTA EEAARAYDAA  60
VVCLRGSSSV LNFPDDPPDI QVAASKHARR SAAPAVADVE LKQSLVGSLL LGEKADLGSS  120
SFGEFHGGGG GYLEAEERGR GGSAGAGGDD VIGGGVFFDT PRVWKF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-1815761274Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.J00902.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012851158.17e-93PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLA0A022QAY13e-58A0A022QAY1_ERYGU; Uncharacterized protein (Fragment)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA21241165
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G21960.11e-18ERF family protein