PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Migut.H01915.1.p
Common NameLOC105970386, MIMGU_mgv1a010607mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Phrymaceae; Erythranthe
Family NAC
Protein Properties Length: 308aa    MW: 34383.4 Da    PI: 8.0359
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Migut.H01915.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM153.41e-47141381128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrF Ptdeel+v+yL++k++g++++l +vi +vd+yk++ wdLp+k+  +ekewy Fs+rd+ky++g+r+nr++ sgyWkatg+dk + 
  Migut.H01915.1.p  14 LPPGFRFYPTDEELMVKYLCRKIAGHHFPL-QVIGDVDLYKFDAWDLPSKALFGEKEWY-FSPRDRKYPNGSRPNRVAGSGYWKATGTDKIIS 104
                       79****************************.99***************77777889996.79**************************99998 PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + +g++vg+kk Lvfy g+apkg+kt+W+mheyrl
  Migut.H01915.1.p 105 T-EGRKVGIKKALVFYIGKAPKGTKTNWIMHEYRL 138
                       8.999****************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.14E-619161IPR003441NAC domain
PROSITE profilePS5100555.01214161IPR003441NAC domain
PfamPF023656.3E-2315138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    Send to blast
MGIREPDPLS QLSLPPGFRF YPTDEELMVK YLCRKIAGHH FPLQVIGDVD LYKFDAWDLP  60
SKALFGEKEW YFSPRDRKYP NGSRPNRVAG SGYWKATGTD KIISTEGRKV GIKKALVFYI  120
GKAPKGTKTN WIMHEYRLSE PPRKNGSTRL DDWVLCRIYE KNSTGSKAAV SGVRSSEFSH  180
DSPSSSSSQY DDVLDSLPEF DDRRYFSATG MEYSVNSCQQ EKDDKAVNLL QHMGSGNFDW  240
ATLAGLNPPV RAAQYGSRND MFAPASNNSG YIFPQNPVEF AQGFSESVDP FSAQYPAAQP  300
GGFGFKQ*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A1e-10311674171NO APICAL MERISTEM PROTEIN
1ut4_B1e-10311674171NO APICAL MERISTEM PROTEIN
1ut7_A1e-10311674171NO APICAL MERISTEM PROTEIN
1ut7_B1e-10311674171NO APICAL MERISTEM PROTEIN
3swm_A1e-10311677174NAC domain-containing protein 19
3swm_B1e-10311677174NAC domain-containing protein 19
3swm_C1e-10311677174NAC domain-containing protein 19
3swm_D1e-10311677174NAC domain-containing protein 19
3swp_A1e-10311677174NAC domain-containing protein 19
3swp_B1e-10311677174NAC domain-containing protein 19
3swp_C1e-10311677174NAC domain-containing protein 19
3swp_D1e-10311677174NAC domain-containing protein 19
4dul_A1e-10311674171NAC domain-containing protein 19
4dul_B1e-10311674171NAC domain-containing protein 19
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that acts downstream of MYC2 in the jasmonate-mediated response to Botrytis cinerea infection (PubMed:28733419). With MYC2 forms a transcription module that regulates wounding-responsive genes (PubMed:28733419). Involved in jasmonate- and coronatine-mediated stomatal reopening in response to Pseudomonas syringae pv tomato DC3000 infection (PubMed:25005917). Regulates the expression of threonine deaminase 2 (TD2) through promoter binding (PubMed:28733419). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapMigut.H01915.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by jasmonate (JA) (PubMed:25005917, PubMed:28733419, PubMed:30610166). Induced by wounding (PubMed:28733419, PubMed:25005917). Induced by infection with the fungal pathogen Botrytis cinerea (PubMed:28733419). Induced by coronatine (PubMed:25005917). {ECO:0000269|PubMed:25005917, ECO:0000269|PubMed:28733419, ECO:0000269|PubMed:30610166}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012850648.10.0PREDICTED: NAC domain-containing protein 72-like
SwissprotA0A3Q7HH641e-125JA2L_SOLLC; NAC domain-containing protein JA2L
TrEMBLA0A022QCM20.0A0A022QCM2_ERYGU; Uncharacterized protein
STRINGMigut.H01915.1.p0.0(Erythranthe guttata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA31222452
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.21e-111NAC family protein
Publications ? help Back to Top
  1. Tomato Genome Consortium
    The tomato genome sequence provides insights into fleshy fruit evolution.
    Nature, 2012. 485(7400): p. 635-41
    [PMID:22660326]
  2. Du M, et al.
    MYC2 Orchestrates a Hierarchical Transcriptional Cascade That Regulates Jasmonate-Mediated Plant Immunity in Tomato.
    Plant Cell, 2017. 29(8): p. 1883-1906
    [PMID:28733419]
  3. Liu Y, et al.
    MYC2 Regulates the Termination of Jasmonate Signaling via an Autoregulatory Negative Feedback Loop.
    Plant Cell, 2019. 31(1): p. 106-127
    [PMID:30610166]